Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0541 ATGGCTCTGAATGTTTGTGTCTCTCCTAACCCTAAATGGGTTGCATCTTCTTCCTTAGATAGTGGTTCTTCTTTGAGACCTTCACTTGGGTCTTGTTTTGGTAACTCAAATATTGCTAATGTGAATCTCAACTTGAGTACTAGAACTAGAAGTTTGAGTTTGAGGAGAAGTGTTGGTGTAAGATCTAGTTTGGAAACTGCAGGACCCACAGTCACAGTGGGACAAGTCACTGAGGTAAACAAGGACACCTTCTGGCCGATTGTTAAGGCTGCCGGGGATAAAACCGTTGTTCTAGACATGTACACCCAATGGTGTGGCCCTTGCAAAGTGATGGCTCCAAAGTTTCAAGAATTATCTAAGAAGTATGAGGATGTTGTCTTTCTAAAACTTGATTGCAACCAAGACAACAGGCCATTGGCAAAAGAGCTGGGGATTAAAGTGGTTCCCACTTTTAAAATTCTGAAGGACAACAAGGTTGTAAAAGAAGTTACTGGAGCTAAATTCGATGATTTGGTTGCTGCCATTGACAATGTTCGATTGAGCTAA 546 0.4158 MALNVCVSPNPKWVASSSLDSGSSLRPSLGSCFGNSNIANVNLNLSTRTRSLSLRRSVGVRSSLETAGPTVTVGQVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVMAPKFQELSKKYEDVVFLKLDCNQDNRPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVAAIDNVRLS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0541 181 Gene3D Glutaredoxin 61 180 - -
Pvu8g0541 181 PRINTS Thioredoxin family signature 96 104 - -
Pvu8g0541 181 PRINTS Thioredoxin family signature 104 113 - -
Pvu8g0541 181 PRINTS Thioredoxin family signature 144 155 - -
Pvu8g0541 181 ProSitePatterns Thioredoxin family active site. 97 115 IPR017937 -
Pvu8g0541 181 SUPERFAMILY Thioredoxin-like 70 178 IPR036249 -
Pvu8g0541 181 CDD TRX_family 82 176 - -
Pvu8g0541 181 Pfam Thioredoxin 76 176 IPR013766 -
Pvu8g0541 181 PANTHER THIOREDOXIN F2, CHLOROPLASTIC 1 180 - -
Pvu8g0541 181 ProSiteProfiles Thioredoxin domain profile. 56 180 IPR013766 -
Pvu8g0541 181 PANTHER THIOREDOXIN 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0541 Pvu-Chr8 4735189 4737902 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0541 K03671 - gmx:100499776 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0541 8 4735189 4737902 Pvu8g0541 8 4735189 4737902 ECH