Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0539 ATGGCTAAATCTGGCGGGGTTTGGATTTTGCCGTTCATCGCCGCCTGGTGGTGGCTGTCCACGGCGGCGACGGTGAGGGGTTCGAACTCGACGACGATTTACGACGAGCTTCGGGCGCAGGGTCTTCCGGTGGGGCTTCTTCCGAAGGGAATTGCGAAGTACTCGTTGAACGGAACAAGTGGGGAATTCGAGGTGTGGATGCAGGAACCGTGCAACGCGAGGTTCGAGAACGAGGTGCACTATGATTCCAACATAAAGGGTATCCTCGGATACGGTCGGATCGGGAAATTGTCCGGTATGACGGCGCAAGAGCTCTTTCTGTGGTTCCCTGTTAAGGGCATTCGTGTGGATGTCCCCACCTCTGGTCTTATACACTTTGATGTTGGTGTTGCTGATAAACAGTTCTCTCTGTCTCTCTTTGAAGACCCTCCTGATTGTAACCCTCAGGTTAATGTTGGTAGTGAAGGTGTTCGGCTGAGGGCTGCTTGGTAG 492 0.5366 MAKSGGVWILPFIAAWWWLSTAATVRGSNSTTIYDELRAQGLPVGLLPKGIAKYSLNGTSGEFEVWMQEPCNARFENEVHYDSNIKGILGYGRIGKLSGMTAQELFLWFPVKGIRVDVPTSGLIHFDVGVADKQFSLSLFEDPPDCNPQVNVGSEGVRLRAAW* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0539 163 Pfam Protein of unknown function, DUF538 34 141 IPR007493 -
Pvu8g0539 163 Gene3D - 18 150 IPR036758 -
Pvu8g0539 163 PANTHER PROTEIN, PUTATIVE-RELATED 19 150 - -
Pvu8g0539 163 PANTHER T31J12.3 PROTEIN-RELATED 19 150 IPR007493 -
Pvu8g0539 163 SUPERFAMILY At5g01610-like 12 147 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0539 Pvu-Chr8 4719152 4722223 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0539 - - gmx:100778787 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0539 8 4719152 4722223 Pvu8g0539 8 4719152 4722223 ECH