Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0530 ATGGAGGTTGTTTCGCAGCCTCTGTGCACCATTCTATTCGCCACGTGCAAACACTCACTTCTCATTCCGCAAAAAATCCCCAATCCTTCTAAACACTTTCCCTTCTTCTCTTTTCGCTCCACCACTCTCTCCTCTTCTTCGCGTTTTTCTCCTCCGTCTCTTTTGTTCGCGGCGCCGGAGAACCAATTGAGTGTTGGTGAAGGAGAGAACACCGATGCAAGTGATTGGGCACTGCAAGATTTTTATTCCCTGAGGAGGGATGTTGAAATTATGTTACAACGTGTTGAAGAGATTAGAGAGTCTTCTGGTCTACAATTACTGGAGCAAGAACTTGCCAATTTGGAGGAGCAAGCAGCTGATAGCTCTTTCTGGGAAAATCGGGCCAATGCTCAAAAGACTCTTTCGACCTTGGCTGATATTAAAGAGAAGATAAAATTACTCAATGATTTTAAAACCCAGGTTGAGGATGCAGAAACAATAGTTAAGCTGACCGAGGAAATGGAATCCATTGACAGAGGACTTTTTGATGAGGCCGCCAATCTTATTAAAGAACTGAATAAATCGCTAGATCGATATGAGCTAACTCAACTTCTCTCTGGTCCTTATGATAAAGAAGGTGCTGTTATCTCTATTACAGCAGGTGCTGGTGGTACTGATGCCCAGGATTGGGCAGACATGCTTCTTAGGATGTACGTGAGATGGGGTGAGAAACAGAGATACAAGACCAGAGTGATAGAGAAATCCCCCGGAGAAGAAGCTGGAATTAAATCTGCCACTGTTGAAGTTGAAGGTCGTTATGCATATGGGTATTTGTCTGGGGAGAAAGGAACACATCGCATTGTTCGTCAATCACCTTTTAATGCCAAAGGCCTTCGTCAGACAAGCTTTTCTGGTGTTGAGGTTATGCCTCTTCTGCCCGAGGAATCTATGAATGTTGAAATTCCCGAGGAGGACCTGGAAATTAGTTTTTCAAGAGCAGGTGGAAAGGGAGGTCAAAATGTGAACAAGGTTGAAACTGCAGTTCGGATTACACACATTCCAACTGGTGTCACTCTTCGCTGCACAGAGGAGAGATCACAACTAGCGAATAAGATCAGAGCTTTAAGCCGTTTGAAAGCCAAGTTGTTGGTTATAGCTGAAGAGCAGCGCGCATCAGAGATTAAGCAGATTCGAGGGGACGTAGTCAAAGCTGAATGGGGGCAACAAATACGGAACTATGTATTCCATCCATACAAACTAGTTAAAGATGTAAGAACAGGGTATGAAACGACAGATGTCATCTCTGTAATGGATGGCGAGTTGGACCCCTTCGTCAAATCTTACCTCAAATTCAAGTTCAATATGTCACTGTCGACAAGTGTCGTTAACTGA 1371 0.4398 MEVVSQPLCTILFATCKHSLLIPQKIPNPSKHFPFFSFRSTTLSSSSRFSPPSLLFAAPENQLSVGEGENTDASDWALQDFYSLRRDVEIMLQRVEEIRESSGLQLLEQELANLEEQAADSSFWENRANAQKTLSTLADIKEKIKLLNDFKTQVEDAETIVKLTEEMESIDRGLFDEAANLIKELNKSLDRYELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVIEKSPGEEAGIKSATVEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIRALSRLKAKLLVIAEEQRASEIKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGYETTDVISVMDGELDPFVKSYLKFKFNMSLSTSVVN* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0530 456 PANTHER PEPTIDE CHAIN RELEASE FACTOR 2 45 449 - -
Pvu8g0530 456 PANTHER PEPTIDE CHAIN RELEASE FACTOR PRFB1, CHLOROPLASTIC-RELATED 45 449 - -
Pvu8g0530 456 TIGRFAM prfB: peptide chain release factor 2 83 445 IPR004374 GO:0005737|GO:0006415|GO:0016149
Pvu8g0530 456 Pfam RF-1 domain 309 418 IPR000352 GO:0003747|GO:0006415
Pvu8g0530 456 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 325 341 IPR000352 GO:0003747|GO:0006415
Pvu8g0530 456 SMART PCRF_a_2 162 274 IPR005139 GO:0006415
Pvu8g0530 456 SUPERFAMILY Release factor 107 446 IPR045853 -
Pvu8g0530 456 Coils Coil 175 195 - -
Pvu8g0530 456 Gene3D Release factor 80 195 - -
Pvu8g0530 456 Gene3D - 305 401 - -
Pvu8g0530 456 Hamap Peptide chain release factor 2 [prfB]. 80 446 IPR004374 GO:0005737|GO:0006415|GO:0016149
Pvu8g0530 456 Gene3D - 209 439 - -
Pvu8g0530 456 Pfam PCRF domain 107 299 IPR005139 GO:0006415
Pvu8g0530 456 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0530 Pvu-Chr8 4630908 4636317 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0530 K02836 - gmx:100775574 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0530 8 4630908 4636317 Pvu8g0530 8 4630908 4636317 ECH