Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0529 ATGCGTTTTTGCCCGTGCTTTGGATCCGACGAGGTGAGGGCGATCGCCGATCGCGACCCGGTTCTGCTGGTTTCGGGTATGGGCGGCTCCATTGTGAATTCCAAGCCCAAGACATTCGGGTTCACCACTCGGGTTTGGGTCAGGCTTCTGCTCGCTGACATGGAGTTCCGGAAGAAGATTTGGTCTCTTTACAATCCCAAAACAGGCTACTGTGAAACGTTGGACAAGAAGTCTAAGCTTGTGGTCCCTGACGATGATCACGGTCTCTATGCGATCGATATTTTGGATCCTTCGTGGTTTACGAAGTGTGTGCATTTGACGGAGGTGTATCATTTTCACGACATGATTGAGATGCTTGTTGGATGCGGTTACGAGAAGGGAACCACGCTGTTTGGGTTCGGATATGATTTCCGCCAAAGCAATAGGATTGACAAGTCAATGGAAGGTCTTAAACATAAGTTGGAGACTGCTCACAAAGCTTCGGGTGGAAGAAAAGTCAATTTAGTTTCACATTCCATGGGAGGAATTATGATTTCGTGTTTCATGTCGCTTCACAGAGATGTGTTTACGAAATATGTGAATAAGTGGATTTGCTTGGCTTGTCCTTTCCAAGGAGCCCCAGGGTGCATCAATGATTCTTTATTAACTGGATTAGAGTTTGTTGATGGCTTTCAAAGCTACTTTTTTGTGAAAAGGTGGACTATGCATCAATTGCTAGTGGAGTGTCCATCAGTCTATGAAATGTTGGCAAATCCATCTTATGAATGGAAAAAGCAGCCAGAAATTCTAGTCTGGCGAAAGCATACAAAGGACGGGGAGAATAACAGCAATTTGGAATCTTATGGACCAACCCAGAGTATATCTTTATTTGAAGAAGCACTGAGGCATAATGAGCTAAGTTATAATGGGAAAACGATATCGCTGCCCTTTAACTTTGATATCCTAGACTGGGCTATTAAAACACGACAACTTACCGCAAATGCTACACTGCCAGATGGAGTCAGCTTCTATAACATTTATGGGACATCATTGGACACCCCTTTTGATGTTTGTTATGGTTCGGAAGATTCTCCAATTGAGGACTTATCCGAAATTTGCCACACAATGCCACAATATTCTTATGTCGATGGAGATGGAACAGTTCCTACTGAATCTGCGAAGGGTGATGGACTGAAAGCCACAGAAAGGGTGGGAGTTGCTGCTTCTCATCGTGGAATATTACGAGATGAAACAGTATTTCAACTTATTAAAAAATGGTTGGATGTTGAGCCAATGGTTAGTAAGCAATCTAAAACATCTAAAGTTGCAGATGCTGATCCAATCGTGCATATGGCTCTATAA 1341 0.4333 MRFCPCFGSDEVRAIADRDPVLLVSGMGGSIVNSKPKTFGFTTRVWVRLLLADMEFRKKIWSLYNPKTGYCETLDKKSKLVVPDDDHGLYAIDILDPSWFTKCVHLTEVYHFHDMIEMLVGCGYEKGTTLFGFGYDFRQSNRIDKSMEGLKHKLETAHKASGGRKVNLVSHSMGGIMISCFMSLHRDVFTKYVNKWICLACPFQGAPGCINDSLLTGLEFVDGFQSYFFVKRWTMHQLLVECPSVYEMLANPSYEWKKQPEILVWRKHTKDGENNSNLESYGPTQSISLFEEALRHNELSYNGKTISLPFNFDILDWAIKTRQLTANATLPDGVSFYNIYGTSLDTPFDVCYGSEDSPIEDLSEICHTMPQYSYVDGDGTVPTESAKGDGLKATERVGVAASHRGILRDETVFQLIKKWLDVEPMVSKQSKTSKVADADPIVHMAL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0529 446 Gene3D alpha/beta hydrolase 79 421 IPR029058 -
Pvu8g0529 446 PANTHER PHOSPHOLIPASE A(1) LCAT3 3 439 - -
Pvu8g0529 446 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 3 439 - -
Pvu8g0529 446 Pfam Lecithin:cholesterol acyltransferase 84 386 IPR003386 GO:0006629|GO:0008374
Pvu8g0529 446 SUPERFAMILY alpha/beta-Hydrolases 17 387 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0529 Pvu-Chr8 4615185 4624365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0529 4 438 Acyl Lipid Metabolism Gene Families AT3G03310 67.347 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0529 K22389 - gmx:100797043 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0529 8 4615185 4624365 Pvu8g0529 8 4615185 4624365 ECH