Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0434 ATGGCACAATTCGAGCAAATCACCTGTTTTATAATTTCCATGCTTCTAATATGTCTGCTAACATGTTCATTATCCGAAGGTTCTGATGACATATTCAGCTCAACAGAAAACACAGAAAACTGGTTAAACCATGGTGGGGATATATTCAACAGAAGATATGCCAGCATGGAGCACAAGATCAGCGTTGAAACTGTTTCCAACTTAAGTTTGAAGTGGAAGTTCAACGCAGGCAAAGACATAACTGCAACTCCAGCTATTTTTGATGGCATACTCTACTTTCCATCGTGGAATGGAGACATTTTTGCGGTGAGAACACAAGATGGATCTCTGGTGTGGAGGCAGAACTTGCAGAATCTAACGAAGCTAAGTGCAACAGGGTTTGTGGCAGGTGTTAACTGGACAGTGGCAAGAGCAACACCAACTATAGCAGAAGATGATCTTCTGGTGGTTGGAATATATGGTCCTGCAGTTGTTATTGCTGTGAAAAGATCAACAGGAGAATTAGTTTGGAAGACACGTTTGGACAGCCATAACTCAAGTATTATCACCATGTCTGGAACCTACTACAAAGGGGCTTACTATGTCGGGACATCTTCACTAGAAGAAATTATCACATCTGAAGAATGTTGCACCTTTCGAGGAAGCTTCTCAAAGCTAGATATTAAATCTGGTGTGATTTTGTGGCAAACCTTCATGCTACCTGATAATAATGGAAAAAAAGGAGAATATGCTGGAGCAGCTATATGGGGAAGTAGCCCTTCCATTGATGCATCAAGGAACCATATATATATTGCCACTGGAAACTTGTATTCTGCCCCTTTGAACATACTTGAATGTCAAGAAAGAGAAAACAATGCAACACAACCCACTCATCCTGATCAGTGTGTTGAGCCAGACAATCACTCTGATTCCTTCCTTGCACTTGACTTGGATGATGGAAAAATCAAATGGTACCACCAATTGGGAGGGTATGATGTGTGGCTCCTTTCATGCCGCAATTTGTCAACACCTAATTGTCCACCTGGTCCTAACCCAGATGCTGATTTTGGAGAGGCACCAATGATGCTCACAATTCATGTCAACAAAACAAAACAAGATGTTGTTGTTGCTGTTCAAAAGAGTGGTTTTACTTGGGCTTTGCACCGTCATGACGGCAAGCTGATTTGGTCTACGGAAGCTGGACCCGGAGGAGTTGCAGGAGGTGGAACATGGGGAGCAGCCACTGATGAAGAAAGAGTATATACTAACATTGTTAATTCGGATGGCAAGAACTTCACTCTTAGACCATCGAACAAGACTACGAGAACAGGAGGGTGGGTTGCAATGGAGGGAAAGAGTGGGAAGATCTTGTGGTCCACAGAAAACCCTAGTAATGCGAATGCTTATGGTCCTGTTACTGTAGCTAATGGCATTGTGTTTGCAGGATCCGTAGATTCAAAAGGAGCTATTTATGCAATGAACGCTGAGAGTGGCAATATTGTATGGTCATATGAGACTGGATCAACAGTGTATGGTGGCATGTCTGTGAGTGATGGGTGCATATATGTTGGAAATGGATACAAGGTAGGCATTGGATTGAATCTTGGAAATTTTACTGCTGGAACTTCGCTTCTTGCCTTTTGTGTCTAA 1629 0.4248 MAQFEQITCFIISMLLICLLTCSLSEGSDDIFSSTENTENWLNHGGDIFNRRYASMEHKISVETVSNLSLKWKFNAGKDITATPAIFDGILYFPSWNGDIFAVRTQDGSLVWRQNLQNLTKLSATGFVAGVNWTVARATPTIAEDDLLVVGIYGPAVVIAVKRSTGELVWKTRLDSHNSSIITMSGTYYKGAYYVGTSSLEEIITSEECCTFRGSFSKLDIKSGVILWQTFMLPDNNGKKGEYAGAAIWGSSPSIDASRNHIYIATGNLYSAPLNILECQERENNATQPTHPDQCVEPDNHSDSFLALDLDDGKIKWYHQLGGYDVWLLSCRNLSTPNCPPGPNPDADFGEAPMMLTIHVNKTKQDVVVAVQKSGFTWALHRHDGKLIWSTEAGPGGVAGGGTWGAATDEERVYTNIVNSDGKNFTLRPSNKTTRTGGWVAMEGKSGKILWSTENPSNANAYGPVTVANGIVFAGSVDSKGAIYAMNAESGNIVWSYETGSTVYGGMSVSDGCIYVGNGYKVGIGLNLGNFTAGTSLLAFCV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0434 542 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 35 506 IPR011047 -
Pvu8g0434 542 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 1 542 - -
Pvu8g0434 542 Pfam PQQ-like domain 72 317 IPR002372 -
Pvu8g0434 542 Pfam PQQ-like domain 434 516 IPR002372 -
Pvu8g0434 542 SMART ire1_9 140 173 IPR018391 -
Pvu8g0434 542 SMART ire1_9 464 498 IPR018391 -
Pvu8g0434 542 SMART ire1_9 253 320 IPR018391 -
Pvu8g0434 542 SMART ire1_9 84 115 IPR018391 -
Pvu8g0434 542 PANTHER POLYVINYLALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 542 - -
Pvu8g0434 542 Gene3D - 25 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0434 Pvu-Chr8 3689378 3693416 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0434 - - gmx:100791552 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0434 8 3689378 3693416 Pvu8g0434 8 3689378 3693416 ECH