Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0426 ATGTATACTGACGGTTACACTGCTCTAGTTACAAACTTATCTCCAAGAGCAACAGAGAATGATGTACACAATTTTTTTGCTTATTGTGGTCCAACTGAGCATGTTGAAATAATAAGATCTGGTGAAAATGCTTCTACTGCATATGTGACTTATCGGGATGCTTATGCCCTGGAAACTGCACTATTGCTAAATGGATCAATGATATTGGACCAATGTATATTCATTTCACGCTATGAAGCTTACGTAAATGACTATGATAATTGGGGCAGTCATGTATTAAAGCCTGAAGACAGTATTACAACCTCACAAGGTGATCGCATGGATAAGTTTGTTTCTTCCCCAGGAGAAGCACTAACTCTGGCTCAGGTGGTTGTCAAAACAATGGTGGCTAAGGGATATGTGTTGGGCAAAGATGCATTTGTCATGGCAAAAGCTTTTGATGAATCTCATAATGTGTCATCTACAGCATCATCAAAGGTTGCTGAACTCAGCAATAAAATTGGGTTGACTGATACCATTAATTCAGGCATTGAAACTTTTAAATCTGTGGATGAGAAGTATCATGTCACAGACTTCACCAAATCAGCTGCAACAGTGACTGGGACCACAGCTATAGTTGTGGCATCAGTTACCGGTAAAGCTGCTGCGGCAGCTGGAAATGCTATAGCCAACAGTAGCTACTTTGCCAAAGGTGCTCTTTGGGTTTCAGATATGTTGACACGTGCAGCCAAAGCAGCTGCTGATTTGGGTCAGAGTGAAAAGAAATGA 768 0.4089 MYTDGYTALVTNLSPRATENDVHNFFAYCGPTEHVEIIRSGENASTAYVTYRDAYALETALLLNGSMILDQCIFISRYEAYVNDYDNWGSHVLKPEDSITTSQGDRMDKFVSSPGEALTLAQVVVKTMVAKGYVLGKDAFVMAKAFDESHNVSSTASSKVAELSNKIGLTDTINSGIETFKSVDEKYHVTDFTKSAATVTGTTAIVVASVTGKAAAAAGNAIANSSYFAKGALWVSDMLTRAAKAAADLGQSEKK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0426 255 SUPERFAMILY RNA-binding domain, RBD 5 79 IPR035979 GO:0003676
Pvu8g0426 255 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 80 IPR000504 GO:0003723
Pvu8g0426 255 Gene3D - 2 82 IPR012677 -
Pvu8g0426 255 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 254 - -
Pvu8g0426 255 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 72 IPR000504 GO:0003723
Pvu8g0426 255 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 254 - -
Pvu8g0426 255 SMART rrm1_1 7 76 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0426 Pvu-Chr8 3623293 3627404 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0426 - - gmx:100784005 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0426 8 3623293 3627404 Pvu8g0426 8 3623293 3627404 ECH