Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0394 ATGGCCATAATGTCCAATCTTCATCATGTTCTTATTGTTTTTCTTCTGGCCCCTGCATTGATGTGTAGCATTGTGGATTCAATGCTGTTCGAGGTGAGATCCTCTCATCCCAAGTGCATTTCCGAGGATATGAAGGCCAACGTCATCTCCGCCGGCAATTACCACGTCGTTAATCACAACAATGTCGGCACCGTTCCTGATGATCACAAGATCTCTGTTAGGGTGCGTTCGCCTCATGGACACGGTTATCACTATGGGGATAATGTGCTTTTTGGTGATTTTGCATTTACTGCAGCTGAGTCTGGTGATTACACCGCTTGTTTTTCGGTGCAAGCGCAGACCATGGATCCTGTTACCATTGATTTTGTTTGGAAAACTGGGGTTGCTGCCAAGGACTGGAACAATGTTGCCAAGAAAGGCCAGATTGATGAAATGGAATTGGAGTTAAGGAAGTTGAATGAGGCCGTCACATCTATCCACGACGAGATGTTTTATCTTCGTGAAAGGGAGATAGAGATGCAAGAGCTTACCGACGAGACTAACACCAAGATGTTCAACTACAGTTTCATTTCAATTTTAGTTTGCTTGTCTGTGGCTGGTTTGCAACTGTGGCATTTGAAGACATTCTTTGAGAGGAAGAAGCTCCTCTAG 651 0.447 MAIMSNLHHVLIVFLLAPALMCSIVDSMLFEVRSSHPKCISEDMKANVISAGNYHVVNHNNVGTVPDDHKISVRVRSPHGHGYHYGDNVLFGDFAFTAAESGDYTACFSVQAQTMDPVTIDFVWKTGVAAKDWNNVAKKGQIDEMELELRKLNEAVTSIHDEMFYLREREIEMQELTDETNTKMFNYSFISILVCLSVAGLQLWHLKTFFERKKLL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0394 216 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24DELTA7 11 216 - -
Pvu8g0394 216 SMART EMP24_GP25L_2 27 211 IPR009038 -
Pvu8g0394 216 ProSiteProfiles GOLD domain profile. 37 151 IPR009038 -
Pvu8g0394 216 Coils Coil 135 162 - -
Pvu8g0394 216 Pfam emp24/gp25L/p24 family/GOLD 29 211 IPR009038 -
Pvu8g0394 216 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 11 216 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0394 Pvu-Chr8 3277947 3281394 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0394 K20352 - gmx:100792995 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0394 8 3277947 3281394 Pvu8g0394 8 3277947 3281394 ECH