Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0390 ATGAAGTTTGGGAAAGAATTTCTCTCACAGATGGTGGCAGAATGGGAAGAAGCATACATGGATTACAACTCTCTCAAAACCATTCTGAAACACAAATCAAGGTTTATGGAGTTGAACGAGTCGGTAGCAATGGCATCCACTCCAAAAGGATCACTGAAGAGAAGGTTAACCCTCTATAGAGCCTTTAGTGGTCTTACAGGTAGACAAAGAGGGTCTCCAAAGAAGAGTGAGGATGAAGTTATACTTGTTCGTGCTGAGGAGGGTGAAGGTTCAGAAGGTTTGTACCAGACCATGTTCCTCAAGCCTTCTGAAGAAGGGGCAGAGCAAGATCTTGTGTTTTTCAAGAATCTTGATCGCGAGTTTAACAAGGTCAATAATTTCTACAAGAAAATGGTGAAGGAAATGGTTGAGGAGGCAGAGGAGTTAACTAAGCAAATGAATGCTTTGATTGCTTTAAGAATAAAGGTGGATAAGGTGGGGTTCAGAAATGTTGCTAGCAATGACAGATCAATTTCAATTTCCATGAATGATCATATAAATGATGCCAGGCCTGGTCACTCACGTGCGCACATGGATGTGATTCATGAAATTGAGTTGAGCAATGAAAGTCATTTGGAAAATGAAACTGGAAACTACGACAAACAAACCACTTCTAAGACTTCTGAGGAAGGCTTTAGACCAGCTTCAGTGGAGATCCTTGATCATGTTAAGATGACCATGACCACACTAGAGTCTCATATATCAACCATAAAAGGGCTTCTTTCGAGTTCAAAACCTGACCAAACATTTAGCAGGAAAGAGCTCACGAAAGCGGAGGAACAAATGAGCACAGCCTTAAAGGAATTCTATCGTAGGCTTCGACTTCTAAAAAGCTATAGTTTCTTAAACTTGTTGGCATTCTCAAAAATCATGAAGAAATATGACAAGGTCAGTTCAAGGAATGTATCAAAGGATTACTTAAAGATGGTGGACAGTTCATATGTTGGAAGCTCAGATGAGGTTAATAGGCTCATGGTAAAGGTTGAACACGCCTTCATTAAGCACTTCGCAAATGGGAATCACAGGAAAGGAATGAACACATTGAGACCAACTGCTAAGAAGGAGCGCCATAGAATCACATTCTTACTGGGGTTATTTACTGGCTGCTCAATTGCCCTCATTGTGGCTCTTGTTATACTCATACATGTAAGAAATATTCTATACAGCGCGGGACGTACTAAATATATGGACAACATATTTCCTCTTTATAGCCTCTTTGGATACCTAGTCTTGCATATGATCATGTACTCTGCAAATGTATACTTCTGGAGGCGTTATACAATCAACTACCCCTTTATATTTGGCTTCAAGGAAGGAACAGAATTGGGATATAGAGAAGTCTTTCTTCTTAGCTCTGGCCTTGCAGTACTCTCATTGGCTGCAGTCCTCTCAAACTTGGACATGGAGATAGAACAGAGAACAAAAAGTTTCTCAGCATTTACAGAATTAGTCCCTTTAGGCCTTGTCATTGTTCTGCTTCTCATCACATTTTGTCCCTTCAACCTTATATATAAATCCAGTCGCTTCTTCCTTATTCGATGTGCATTTCATTGCGTTTGTGCTCCTCTTTACAAGGTCAATCTCCCAGAAAATTTCTTGGCAGACCAGCTTACCAGTCAGGTGCAAGCCTTTAGAAGTTTGGAATTCTATGTCTGCTACTATTTCTGGGGAAACATCAAGACCAGGTCAAACAAGTGCCTTAAAAGTGATGTCTACAGGGCATTTTATTTAATTGTAGCTATTATTCCGTTCTGGATCCGCTGTCTCCAGTGCTTTCGACGCTTACTTGAAGAAAGAAATACGATGCACGGTCTGAATGGGCTAAAGTACATCTCAACAATAGTAGCACTTGTGATGAGGACTACTAATGAGTTCCATAAAGGAATCGTTTGGAAAATTCTGGCTGCAATTTCTTCAAGCATTGCAACGATTTTTAATACATATTGGGATGTTGTCATAGACTGGGGTTTGCTTAGAAGAAATTCAAAAAATCCATGGTTGAGAGAAAAACTCTCTGTACCAAACAAAAGTGTATATTTTGCTGCTATGGTGTTGAATGTTGTATTGCGACTTGTATGGATGCAATCTGTTTTAGGCATTACGGAAGCTCCTTTTCTGCATAAAACAGCTTTGACTGCTCTTGTAGCATGCTTGGAGATCCTTCGCCGTGGTATTTGGAATTTTTTCAGGTTGGAGAATGAACACTTGAACAATGTTGGGAACTACCGAGCATTCAAATCAGTACCTCTGCCTTTTAATTATGAAGATGAAGAGAGCGAATCATGA 2325 0.4004 MKFGKEFLSQMVAEWEEAYMDYNSLKTILKHKSRFMELNESVAMASTPKGSLKRRLTLYRAFSGLTGRQRGSPKKSEDEVILVRAEEGEGSEGLYQTMFLKPSEEGAEQDLVFFKNLDREFNKVNNFYKKMVKEMVEEAEELTKQMNALIALRIKVDKVGFRNVASNDRSISISMNDHINDARPGHSRAHMDVIHEIELSNESHLENETGNYDKQTTSKTSEEGFRPASVEILDHVKMTMTTLESHISTIKGLLSSSKPDQTFSRKELTKAEEQMSTALKEFYRRLRLLKSYSFLNLLAFSKIMKKYDKVSSRNVSKDYLKMVDSSYVGSSDEVNRLMVKVEHAFIKHFANGNHRKGMNTLRPTAKKERHRITFLLGLFTGCSIALIVALVILIHVRNILYSAGRTKYMDNIFPLYSLFGYLVLHMIMYSANVYFWRRYTINYPFIFGFKEGTELGYREVFLLSSGLAVLSLAAVLSNLDMEIEQRTKSFSAFTELVPLGLVIVLLLITFCPFNLIYKSSRFFLIRCAFHCVCAPLYKVNLPENFLADQLTSQVQAFRSLEFYVCYYFWGNIKTRSNKCLKSDVYRAFYLIVAIIPFWIRCLQCFRRLLEERNTMHGLNGLKYISTIVALVMRTTNEFHKGIVWKILAAISSSIATIFNTYWDVVIDWGLLRRNSKNPWLREKLSVPNKSVYFAAMVLNVVLRLVWMQSVLGITEAPFLHKTALTALVACLEILRRGIWNFFRLENEHLNNVGNYRAFKSVPLPFNYEDEESES* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0390 774 Coils Coil 125 152 - -
Pvu8g0390 774 MobiDBLite consensus disorder prediction 210 224 - -
Pvu8g0390 774 Pfam EXS family 413 749 IPR004342 GO:0016021
Pvu8g0390 774 MobiDBLite consensus disorder prediction 204 224 - -
Pvu8g0390 774 Pfam SPX domain 1 323 IPR004331 -
Pvu8g0390 774 PANTHER PHOSPHATE TRANSPORTER PHO1-LIKE PROTEIN 9 1 68 - -
Pvu8g0390 774 PANTHER PHOSPHATE TRANSPORTER PHO1-LIKE PROTEIN 9 76 772 - -
Pvu8g0390 774 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 68 - -
Pvu8g0390 774 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 76 772 - -
Pvu8g0390 774 ProSiteProfiles EXS domain profile. 580 774 IPR004342 GO:0016021
Pvu8g0390 774 CDD SPX_PHO1_like 2 317 IPR034092 -
Pvu8g0390 774 CDD SPX 243 309 - -
Pvu8g0390 774 ProSiteProfiles SPX domain profile. 1 321 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0390 Pvu-Chr8 3234893 3240176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0390 - - gmx:100795104 1305.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0390 8 3234893 3240176 Pvu8g0390 8 3234893 3240176 ECH