Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0007 ATGAAGAACTCTCTGAAGAAATTGCGAGGTTTGGCGCTTCAGAATCATAACCACAATCGCAGTCACAAGCATGCCTCCTCCAACTCCATTCAGCCTCTCGGCCAGCTTGACGAGCTCGCTCGGGCCACCCAGGATATGCAAGACATGAAGGACTGCTACGACACCTTGCTTTCCGCCGCCGCCGCAACCGCCAGCAGTGCCTATGAATTCTCCGAGTCCTTGCGGGACATGGGCTCTTGTCTTCTCGAGAAGACCGCTTTGAATGATCACGGAGATGAAACTGGAAAACTTCTCCTCATGCTTGGCAAAATCCAGTTCCAACTCCACAAACTCATTGATGACTACCGTTCCCATATAATCCAGACAATTACCACTCCCTCAGAGTCTCTCTTGAATGAACTTCGAATTGTTGAGGAGATGAAGCGGCAATGTGATGAGAAAAGAGACTTATATGACTATATGGTAGCAAGATACAGAGAAGGAGGCAGGTCTAAAGGCGGGAAAGGAGAAACTTTTTCTTTGCAGCAGTTGCAAACTGCTCGTGATGAATATGATGAAGATGCTACTTTGTTTGTTTTCCGATTGAAATCTCTGAAGCAAGGACAATCACGTAGTCTTCTAACACAGGCAGCGCGTCACCATGCTTCTCAGTTGTGTTTCTTCAAGAAATCAGTCAAGTCCCTTGAGACAGTAGAACCACATTTAAAATCTGTAACTGAACAACAGCACATTGATTACCAGTTCAGTGGTCTAGACGAGGAGGATGGGTATGAAGGTGACTATGGAGATGATGATGGTGGTGGTTATGATGACAATGATGATGGTGAGCTGAGTTTTGACTATGGACAAACTGAACAAGACCAAGATGTTTCCACATCACGAAACTCCATGGAGCTGGATCAGGTGGAACTTACACCTCCTGGAGGTTTTACAGCTGAAGCTGCTAAGGAAAACTTAGACAAACTTCAAAGGAATTTGTTTTCCTTTAGGACTAGGACAGGGAGCCAATCTGCCCCGCTTTTTGCTGATAATAAACTTGATGCAAGTGAAAAACTGAGACAGATGCGCCCATCTTTATCACGGAAGTTTAGTTCATATGTGCTACCCACACCCGTTGGTGCTAAGAGTTCAATTTCTTCAAGTTCAAATAATCCAAAACCTTCCAAAGTGCAGGAAAATTTAAGTGAACCTACAAAGAACTTGTGGCATTCATCCCCATTGGAACAAAAGAAACATGAAAAAGATATCGGAGATGAATTTTCTGGTTCTACTGTCAGAAGTGCTCAGTCAGTACTCAAGGAAAGTAACACCAATACTGCCTCCACGAGATTGCCTCTTCCTCTGGGAGATAATCTTTTATCCTCAAACGATTACATTTCTGCTCACTCCAAAAAGATTAAAAGACAAGCCTTTTCTGGTCCATTGACAAGTAATCCCGGTCCTACCAAGCCTGTTTTGGTTGATAGTGTTCAACTGTTGTCTGGACCTCTTTTTCCTGGTCCAATTCCTAAGCCTCGGTCATCTTCTCCTAAAGTATCTCCCACTACTTCTCCCACTCTTATGTCTTCACCCAAAATAAGTGAGCTTCATGAACTTCCTAGGCCTCCAACCAGCTTCCCATCCAATTCAAGGCTTTTAGGTTTGGTTGGTCATTCTGGTCCATTGGTGCCTAGAGGTCAAAAGGTTTCCTCTGCAAATAATTTGGTTGCATCAAGTGCTGCATCTCCATTGCCAATGCCACCTCAGGCCATGGCTCGTAGTTTCTCCATACCTTCTAGTGGTGCTAGAGTTGCAGCATTACATGTGCCTAGAACACTAGATTCTTCTCATAGATCATCTATATCTGAGATTGTTGCTTCTCCTCTGATGCCACAAGCGTTATCTAGTAGTCAGCCATCATCAGATTGCTGA 1911 0.4427 MKNSLKKLRGLALQNHNHNRSHKHASSNSIQPLGQLDELARATQDMQDMKDCYDTLLSAAAATASSAYEFSESLRDMGSCLLEKTALNDHGDETGKLLLMLGKIQFQLHKLIDDYRSHIIQTITTPSESLLNELRIVEEMKRQCDEKRDLYDYMVARYREGGRSKGGKGETFSLQQLQTARDEYDEDATLFVFRLKSLKQGQSRSLLTQAARHHASQLCFFKKSVKSLETVEPHLKSVTEQQHIDYQFSGLDEEDGYEGDYGDDDGGGYDDNDDGELSFDYGQTEQDQDVSTSRNSMELDQVELTPPGGFTAEAAKENLDKLQRNLFSFRTRTGSQSAPLFADNKLDASEKLRQMRPSLSRKFSSYVLPTPVGAKSSISSSSNNPKPSKVQENLSEPTKNLWHSSPLEQKKHEKDIGDEFSGSTVRSAQSVLKESNTNTASTRLPLPLGDNLLSSNDYISAHSKKIKRQAFSGPLTSNPGPTKPVLVDSVQLLSGPLFPGPIPKPRSSSPKVSPTTSPTLMSSPKISELHELPRPPTSFPSNSRLLGLVGHSGPLVPRGQKVSSANNLVASSAASPLPMPPQAMARSFSIPSSGARVAALHVPRTLDSSHRSSISEIVASPLMPQALSSSQPSSDC* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0007 636 MobiDBLite consensus disorder prediction 373 404 - -
Pvu8g0007 636 PANTHER BNAA05G10100D PROTEIN 1 635 - -
Pvu8g0007 636 MobiDBLite consensus disorder prediction 497 523 - -
Pvu8g0007 636 MobiDBLite consensus disorder prediction 509 523 - -
Pvu8g0007 636 SUPERFAMILY BAR/IMD domain-like 38 237 IPR027267 -
Pvu8g0007 636 Pfam BAR domain 49 236 IPR004148 GO:0005515|GO:0005737
Pvu8g0007 636 MobiDBLite consensus disorder prediction 281 300 - -
Pvu8g0007 636 MobiDBLite consensus disorder prediction 373 447 - -
Pvu8g0007 636 MobiDBLite consensus disorder prediction 405 420 - -
Pvu8g0007 636 MobiDBLite consensus disorder prediction 252 310 - -
Pvu8g0007 636 Gene3D Arfaptin homology (AH) domain/BAR domain 35 254 IPR027267 -
Pvu8g0007 636 MobiDBLite consensus disorder prediction 422 447 - -
Pvu8g0007 636 MobiDBLite consensus disorder prediction 252 280 - -
Pvu8g0007 636 CDD BAR 68 234 - -
Pvu8g0007 636 Coils Coil 312 332 - -
Pvu8g0007 636 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 635 IPR037488 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0007 Pvu-Chr8 163371 169459 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0007 - - vun:114183484 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0007 8 163371 169459 Pvu8g0007 8 163371 169459 ECH