Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2598 ATGTCTAGCTCAGCAAAAGTTTTGGATCCTGCATTTCAGGGAGTTGGTCAAAGAGTAGGAACTGAAATATGGAGGATTGAGAATTTCCAGCCAGTTCCATTGCCCAAATCTGATCATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACTCAAGGCAAAGGTGGTGCTTATTTTTATGATTTACATTTCTGGATTGGAAAAGATACAAGTCAGGATGAGGCTGGAACTGCAGCCATTAAAACTATTGAACTTGACGCTGCTCTTGGAGGGCGTGCAGTGCAGCACAGGGAAATCCAAGGACATGAATCTGACAAGTTTTTGTCATACTTTAAACCATGTATAATACCATTAGCGGGTGGTATTGCATCTGGGTTTAGTAAACCCGAGGAAGAGGAGTTTGAAACACGTTTGTATGTATGCAGAGGGAAAAGAGTTGTTAGATTGAGACAGATCCCTTTTGCAAGGTCTTCGTTGAACCATGATGATGTATTCATAGTCGACACTGAAAGTAAGATATACCAGTTCAATGGTGCGAATTCCAATATTCAGGAAAGAGCCAAAGCTTTGGAAATTATACAATTACTTAAAGAAAAATATCATAAAGGGAAATGTGATGTTGCAATTGTTGATGATGGCAAGTTAGACACGGAGTCCGACTCAGGTGAGTTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATCAGTGAGGATGATATTATTCCAGAGTCAATTCCTGCTCAGCTTTATAGTATTATTGCCAATGGTGAGGTTAAGCCCGTGGAAGGTGAACTGTCTAAATCATTGTTGGAAAACAACAAATGCTATTTATTGGACTGTGGTGCTGAGATATTTACCTGGGTTGGCCGTGTAACACAAGTTGAAGAACGAAAAGCAGCCTGCCAAGCTGTTGAGGAGTTTGTTGCAAGCCAAAATAGGCCAAAATCTACTAGGATAACCAGGATTATTCAAGGTTATGAGACACATTCATTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTAGTACCAATCCAGAGGAAGGAAGAGGAAAAGTTGCAGCACTGCTTAAGCAACAAGGTATGGGTGTCAAAGGAATGACAAAAAGTACCCCTGTAAATGAGGAAATTCCACCTTTGCTTGAAGGAGGTGGGAAGATAGAGGTATGGCGAATTAATGGAAATGCCAAGACTGCATTGCCAAAGGAGGAGATTGGTAAATTTTACAGTGGAGATTGTTATATTGTACTGTACACATACCACACTGGAGAGAGGAAAGAAGACTTCTTCTTGTGCTGTTGGTTTGGTAAAGACAGCATCGAGGAGGACCAAACAACGGCTACTCGGTTGGCCAGTACAATGTGTACCTCATTAAAGGGTAGACCTGTACAGGGACGCATATTTGAAGGCAAAGAACCACCACAATTTGTTGCTCTTTTCCAACCAATGGTGGTACTTAAGGGAGGATTGAGCTCTGGATACAAGAAATTAATAGCAGACAAAAATGCAGAAGATGAGACATATACAGCAGAGTCTATTGCATTTATTCGAATCTCTGGAACTTCTATTCATAACAATAAGTCAGTACAAGTTGATGCAGTGCCGTCATCATTGAATTCTACCGAGTGTTTTGTCCTGCAATCTGGCTCTACAGTTTTCACTTGGCATGGAAATCAGTGTTCCTTTGAGCAGCAACAGCTAGCAGCGAAGGTTGCTGAATTTTTAAGGCCAGGAGTTACTTTAAAGCATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTCTGCCCTAGGAGGAAAACAAGCTTACACCAGCAAGAAGGTTGTTAACGAGGTTGTCAGAGATCCACATTTGTTCACCATATCATTTAACAAAGCAAAGTTCAAGGTAGAGGAGGTTTACAACTTCTCTCAAGATGACCTGTTACCAGAGGATATCCATGTACTTGACACACATGCAGAAGTGTTTATTTGGATCGGTAATTCTGTGGAGCCAAAAGAAAAGCAAAATGCTTTTGAAGTTGGCCAGAAATACATAGATATGGCTGCATCTCTGGAGGGACTATCTCCACATGTACCACTATATAAAATAACGGAAGGGAATGAACCTTGCTTTTTCACAACATACTTCTCATGGGATCATGCAAAAGCTGTGGTTCAGGGGAACTCATTTCAGAAAAAGGTGGCATTACTCTTCGGGGTTGGCCATGCTGCCGAGGATAAGTCAAATGGGTCAAGTCTGGGGGGACCAAGACAAAGAGCTGAAGCTTTGGCTGCCTTATCTAATGCATTTAGTTCATCATCATCTGAGAAAGCATCCAGTATGACACAAGATAGATTGAATGGGTTAAGCCAAGGAGGACCAAGACAAAGGGCAGAAGCTTTAGCTGCTTTGAACTCTGCATTTAATTCATCATCTGGGACAAAGCCTGTAACTCCACCTAAGGGATCTGGAAAAGGTCAAGGATCACAAAGAGCAGCAGCAGTGGCTGCTCTTTCATCAGTTCTTACCGCTGAAAAGAAGAAAACATCACCTGATGGTTCTCCTGTGGCTGGCAGTAGTCCTCTCACTGAAAATAGCCCCACTGTTCTTGCTGCAGAAACCAAAAGTGATTCCTCTGAAGTTGAAGAAGTTGCAGAAGCCAAGGAAACAACAGAGGAACCTGCCCCTGAAACTGGTAGCAATGAGGATATGGAACCAAAAGAAGAAAACGTGGAGGAGTCAAATGGTAATCAAATGACGTTCAGTTATGAACAATTAAAGACTAAATCTGGTATTGATGTGGCTGGAATTGATCTTAAACGGAGAGAGACCTATCTGTCGGAGGAGGAGTTCAACACTATATTTGGAATGGGAAAAGAAGCATTTTATAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAATTCGAATTGTTCTAG 2949 0.4178 MSSSAKVLDPAFQGVGQRVGTEIWRIENFQPVPLPKSDHGKFYMGDSYIILQTTQGKGGAYFYDLHFWIGKDTSQDEAGTAAIKTIELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLAGGIASGFSKPEEEEFETRLYVCRGKRVVRLRQIPFARSSLNHDDVFIVDTESKIYQFNGANSNIQERAKALEIIQLLKEKYHKGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPESIPAQLYSIIANGEVKPVEGELSKSLLENNKCYLLDCGAEIFTWVGRVTQVEERKAACQAVEEFVASQNRPKSTRITRIIQGYETHSFKSNFDSWPSGSASTNPEEGRGKVAALLKQQGMGVKGMTKSTPVNEEIPPLLEGGGKIEVWRINGNAKTALPKEEIGKFYSGDCYIVLYTYHTGERKEDFFLCCWFGKDSIEEDQTTATRLASTMCTSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGLSSGYKKLIADKNAEDETYTAESIAFIRISGTSIHNNKSVQVDAVPSSLNSTECFVLQSGSTVFTWHGNQCSFEQQQLAAKVAEFLRPGVTLKHAKEGTESSAFWSALGGKQAYTSKKVVNEVVRDPHLFTISFNKAKFKVEEVYNFSQDDLLPEDIHVLDTHAEVFIWIGNSVEPKEKQNAFEVGQKYIDMAASLEGLSPHVPLYKITEGNEPCFFTTYFSWDHAKAVVQGNSFQKKVALLFGVGHAAEDKSNGSSLGGPRQRAEALAALSNAFSSSSSEKASSMTQDRLNGLSQGGPRQRAEALAALNSAFNSSSGTKPVTPPKGSGKGQGSQRAAAVAALSSVLTAEKKKTSPDGSPVAGSSPLTENSPTVLAAETKSDSSEVEEVAEAKETTEEPAPETGSNEDMEPKEENVEESNGNQMTFSYEQLKTKSGIDVAGIDLKRRETYLSEEEFNTIFGMGKEAFYKLPRWKQDMLKKKFELF* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2598 982 CDD gelsolin_S4_like 387 488 - -
Pvu7g2598 982 Gene3D Severin 521 614 IPR029006 -
Pvu7g2598 982 SUPERFAMILY VHP, Villin headpiece domain 915 982 IPR036886 GO:0003779|GO:0007010
Pvu7g2598 982 SUPERFAMILY Actin depolymerizing proteins 384 526 - -
Pvu7g2598 982 ProSiteProfiles Headpiece (HP) domain profile. 917 982 IPR003128 GO:0003779|GO:0007010
Pvu7g2598 982 MobiDBLite consensus disorder prediction 845 877 - -
Pvu7g2598 982 SMART VHP_1 947 982 IPR003128 GO:0003779|GO:0007010
Pvu7g2598 982 CDD gelsolin_S3_like 262 344 - -
Pvu7g2598 982 CDD gelsolin_S6_like 623 721 - -
Pvu7g2598 982 PANTHER VILLIN-3-LIKE ISOFORM X1 1 982 - -
Pvu7g2598 982 MobiDBLite consensus disorder prediction 878 907 - -
Pvu7g2598 982 MobiDBLite consensus disorder prediction 775 920 - -
Pvu7g2598 982 SUPERFAMILY Actin depolymerizing proteins 512 613 - -
Pvu7g2598 982 SUPERFAMILY Actin depolymerizing proteins 134 238 - -
Pvu7g2598 982 MobiDBLite consensus disorder prediction 775 792 - -
Pvu7g2598 982 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Pvu7g2598 982 Gene3D Severin 254 353 IPR029006 -
Pvu7g2598 982 SUPERFAMILY Actin depolymerizing proteins 223 346 - -
Pvu7g2598 982 SMART VILL_6 139 234 IPR007122 GO:0051015
Pvu7g2598 982 SMART VILL_6 252 345 IPR007122 GO:0051015
Pvu7g2598 982 SMART VILL_6 625 720 IPR007122 GO:0051015
Pvu7g2598 982 SMART VILL_6 19 117 IPR007122 GO:0051015
Pvu7g2598 982 SMART VILL_6 521 608 IPR007122 GO:0051015
Pvu7g2598 982 SMART VILL_6 393 491 IPR007122 GO:0051015
Pvu7g2598 982 MobiDBLite consensus disorder prediction 805 820 - -
Pvu7g2598 982 Gene3D Severin 615 736 IPR029006 -
Pvu7g2598 982 Gene3D Villin headpiece domain 921 982 IPR036886 GO:0003779|GO:0007010
Pvu7g2598 982 Gene3D Severin 142 236 IPR029006 -
Pvu7g2598 982 CDD gelsolin_S1_like 12 124 - -
Pvu7g2598 982 CDD gelsolin_S5_like 520 609 - -
Pvu7g2598 982 CDD gelsolin_S2_like 138 232 - -
Pvu7g2598 982 Pfam Gelsolin repeat 265 338 IPR007123 -
Pvu7g2598 982 Pfam Gelsolin repeat 636 714 IPR007123 -
Pvu7g2598 982 Pfam Gelsolin repeat 535 584 IPR007123 -
Pvu7g2598 982 Pfam Gelsolin repeat 29 111 IPR007123 -
Pvu7g2598 982 Pfam Gelsolin repeat 412 484 IPR007123 -
Pvu7g2598 982 Pfam Gelsolin repeat 153 217 IPR007123 -
Pvu7g2598 982 Pfam Villin headpiece domain 947 982 IPR003128 GO:0003779|GO:0007010
Pvu7g2598 982 PRINTS Gelsolin family signature 324 345 IPR007122 GO:0051015
Pvu7g2598 982 PRINTS Gelsolin family signature 412 428 IPR007122 GO:0051015
Pvu7g2598 982 PRINTS Gelsolin family signature 438 456 IPR007122 GO:0051015
Pvu7g2598 982 PRINTS Gelsolin family signature 471 491 IPR007122 GO:0051015
Pvu7g2598 982 PRINTS Gelsolin family signature 534 554 IPR007122 GO:0051015
Pvu7g2598 982 PRINTS Gelsolin family signature 594 613 IPR007122 GO:0051015
Pvu7g2598 982 PRINTS Gelsolin family signature 646 668 IPR007122 GO:0051015
Pvu7g2598 982 PRINTS Gelsolin family signature 675 694 IPR007122 GO:0051015
Pvu7g2598 982 PANTHER VILLIN 1 982 IPR007122 GO:0051015
Pvu7g2598 982 Gene3D Severin 390 520 IPR029006 -
Pvu7g2598 982 Gene3D Severin 6 141 IPR029006 -
Pvu7g2598 982 SUPERFAMILY Actin depolymerizing proteins 597 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2598 Pvu-Chr7 49094705 49109396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2598 - - gmx:100788765 1697.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2598 7 49094705 49109396 Pvu7g2598 7 49094705 49109396 ECH
Pvu1g1367 1 37318285 37329805 Pvu7g2598 7 49094705 49109396 PCT