Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2493 ATGATGTCTCAGTCATGTGTTATGATTGCAGCATCACTGTTATTTGTTATAGCACAAAGTGTTGTGGGAGTGAATTCAGCTTCACAAGCTGATAAGATAACCACTTTGCCAGGGCAGCCACCAGTGAAGTTCCAGCAATATGCTGGTTATATTACAGTGGATGAGAAGCAGAAGAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGTGGAACCAGCTTCAAAGCCACTAGTTCTATGGTTAAATGGAGGGCCTGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTTGAGCATGGCCCTTTCAAACCAAGTGAAAATGGTCTTCTGAAAAACGAATTTAGTTGGAACAAAGAGGCAAATATGCTGTACTTGGAATCACCAGCTGGTGTTGGTTTCTCCTACTCTGCCAACAAATCTTTCTATGACTATGTGAATGATGAAATGACAGCAAGGGACAATCTTGTTTTCCTACAGCGATGGTTCACTAAATTCCCAGAGTTCAAGAACAGTGATTTCTTTATCACAGGGGAAAGCTATGCAGGTCACTATGTACCCCAACTTGCACAACTCATTGTTCAAACCAAGACCAAGTTCAATCTCAAGGGAATAGCACTAGGGAATCCTCTTCTAGAATTTAACACGGATTTCAACTCTAGAGCTGAGTTTTTCTGGTCCCATGGCCTAATATCAGATTCAACTTACGAAATCTTCACCAAAGTATGCAACTATTCCCAAATTAGGAGACAACATCAAAGTGGGAAACTTACCCCCATTTGTTCAGGAGTAAATAAGCTAGTGTCAACGGAAGTTAGTAGATATGTTGATACATATGATGTTACACTTGATGTGTGTCTTTCATCAGTAGATCAACAGGCTTATGTGCTGAATCAACTCACTCAACTGCAAGAGGGAGGAAAGATAGATGTTTGTGTGGAAGATGAAACTACTGCATATTTGAATAGGAAAGACGTGCAGGAAGCTCTCCATGCTAAGCTCGAAGGGATCACTTCTTGGTCAGTTTGCAGCGATACTCTTGGATATGACTTGCAGAACCTGGAGATTCCAACTATTCCTATCCTTGGTGCACTTGCTAAGTCTGGTATCAGGGTTCTGGTATACAGTGGAGATCAAGATTCAGTTATCCCATTAATTGGGACAAGATCCCTGGTAAATGGATTGGCCAAGGACTTTGGACTTAACACAACAGTGTCCTACAGAACCTGGTTTGAAGGAAAACAAGTGGCTGGTTGGACACAAGAATATGGAGACATCTTATCATTTGCCACTGTAAGAGGAGCGGCTCATGAAGCTCCATTTTCCCAGCCAGAGAGGTCACTGGTGCTACTGAAAGCATTTTTGGAAGGAAAACCACTTCCAGAACCATTCTTTCAAATGTGA 1398 0.4185 MMSQSCVMIAASLLFVIAQSVVGVNSASQADKITTLPGQPPVKFQQYAGYITVDEKQKRALFYYFVEAEVEPASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENGLLKNEFSWNKEANMLYLESPAGVGFSYSANKSFYDYVNDEMTARDNLVFLQRWFTKFPEFKNSDFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIALGNPLLEFNTDFNSRAEFFWSHGLISDSTYEIFTKVCNYSQIRRQHQSGKLTPICSGVNKLVSTEVSRYVDTYDVTLDVCLSSVDQQAYVLNQLTQLQEGGKIDVCVEDETTAYLNRKDVQEALHAKLEGITSWSVCSDTLGYDLQNLEIPTIPILGALAKSGIRVLVYSGDQDSVIPLIGTRSLVNGLAKDFGLNTTVSYRTWFEGKQVAGWTQEYGDILSFATVRGAAHEAPFSQPERSLVLLKAFLEGKPLPEPFFQM* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2493 465 SUPERFAMILY alpha/beta-Hydrolases 24 461 IPR029058 -
Pvu7g2493 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Pvu7g2493 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Pvu7g2493 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Pvu7g2493 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Pvu7g2493 465 Gene3D - 310 345 - -
Pvu7g2493 465 Gene3D alpha/beta hydrolase 27 285 IPR029058 -
Pvu7g2493 465 Pfam Serine carboxypeptidase 37 455 IPR001563 GO:0004185|GO:0006508
Pvu7g2493 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 462 IPR001563 GO:0004185|GO:0006508
Pvu7g2493 465 Gene3D - 356 455 - -
Pvu7g2493 465 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Pvu7g2493 465 PANTHER CARBOXYPEPTIDASE 20 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2493 Pvu-Chr7 48180220 48184082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2493 318 458 Calmodulin-binding Proteins AT2G22960 29.078 1.60e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2493 K16297 - gmx:100805028 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2493 7 48180220 48184082 Pvu11g0870 11 8129070 8131920 ECH
Pvu7g2493 7 48180220 48184082 Pvu7g2493 7 48180220 48184082 ECH