Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2314 ATGGCATCGAGGCAACACGAGGAACGAGCTGAGGCAGCTTCGAAAATTGCTGCCAAAGAGCTTGAACAAGCCAACAGAGAGAGAGATCGTGAAGATGTGGGCGTTGTGGAACAGCTAAACAATGAAGAAAAGCGTGGTGTGATAGGGTCCATGTTGAAGGCGGTGCAAGAAGCGGTGGTTGGGAAGAAAGATTCAGTTCCTGCGAAATCATGCACCACAGAGGTGATTCATGATGTTAATATCAAACCTGATGACGTGACAACCGGGGAAGTGAGAGACATATCCGTCGCCAAGTCGCCTGGGATCTACGATTCTCCTGCCACGGACGAAACCGGTTCCAAGGTTGGTGAATATGCAGATTGTGCTTCTCAGAAGGCGAAGGAAGCAAAGGATGCAGCAATGGCAAAAGCTGGGGACTACGCAGATTATGCTTCTCAGAAGGCGAAGGAAGCGAAGGACAAGACTCTGGAGAAGGGTGGGGAGTATAAGGACTATGCTGCTGAGAAGGCTAAGGAAGGAAAAGATGCTACAGTGAATAAGCTGGGAGAGTACAAGGATTACACTGCGGAGAAGACGAAAGAAGGGAAGGACACTGCTATGGAGAAGCTTGGGGAGCTGAAGGATTCTGCTACGGAAGCTGCTAAGAAAGCTGTGGAATACTTGAGCGGCAAGACAGAGGAAACCAAAGAGAAGGTCTCGGAATCCGCAGTGATTGCCAAGAACAAGGCAGCGGAGACGGCAGAGACCGCGAAGGATAGAGCGGCGGAGATGAAGGATGCGGCGAAGGACAAGGCTGCTGAAGCTGCCGAGGCAACAAAGAACAAGACCGCTGAGACGACTGAGGCAGCAAAGAATAAGGGTAGGGAGATGAAGGACAAGGCTGCAGAAACTGCGGAGGCAACAAAGAACAAGACTGCTGAGATGACTGAGGCAGCAAAGAAGAAGGCTGCAGAAACTGCTGATGCAACAAAGAACAAGACTGCTGAAACGACCGAGGCAGCGAAGAATAAGGCTGCGGAGATGAAGGACAAGACCTGGGATGCAACTGAAGCAGCAAAGAACAAGACCTGGGAAGCAACTGAGGCAGCAAATAACAAGACTGCGGAGATGAAGGACAAGGCTGCAGAAACCACAGAAGCAGCAAAACAGAAAACTGCACAGGCAAGGGACAAAACCAAGGGGAATGTGAGAGGTGAAGATGAAGATGCAAGGAGGAAACTGGAGGATCTAAAGCTACAAGGGTACAAAGATATATCTGAGGGGCGTGCAGATAAGGTGGTGATGAAAGTGGAAGAGACTCGACCAGGGGCAATAGCGGATACACTGAAAGCCGCGGATCAGAATGCGGGACAGACCTTCAACGATGTGGGACGCTTCCATGATGAGGAGATCGTAAAAAAGAAATAA 1407 0.5018 MASRQHEERAEAASKIAAKELEQANRERDREDVGVVEQLNNEEKRGVIGSMLKAVQEAVVGKKDSVPAKSCTTEVIHDVNIKPDDVTTGEVRDISVAKSPGIYDSPATDETGSKVGEYADCASQKAKEAKDAAMAKAGDYADYASQKAKEAKDKTLEKGGEYKDYAAEKAKEGKDATVNKLGEYKDYTAEKTKEGKDTAMEKLGELKDSATEAAKKAVEYLSGKTEETKEKVSESAVIAKNKAAETAETAKDRAAEMKDAAKDKAAEAAEATKNKTAETTEAAKNKGREMKDKAAETAEATKNKTAEMTEAAKKKAAETADATKNKTAETTEAAKNKAAEMKDKTWDATEAAKNKTWEATEAANNKTAEMKDKAAETTEAAKQKTAQARDKTKGNVRGEDEDARRKLEDLKLQGYKDISEGRADKVVMKVEETRPGAIADTLKAADQNAGQTFNDVGRFHDEEIVKKK* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2314 468 MobiDBLite consensus disorder prediction 245 271 - -
Pvu7g2314 468 MobiDBLite consensus disorder prediction 365 405 - -
Pvu7g2314 468 MobiDBLite consensus disorder prediction 222 236 - -
Pvu7g2314 468 Coils Coil 240 274 - -
Pvu7g2314 468 MobiDBLite consensus disorder prediction 328 351 - -
Pvu7g2314 468 MobiDBLite consensus disorder prediction 1 37 - -
Pvu7g2314 468 Gene3D - 138 189 - -
Pvu7g2314 468 MobiDBLite consensus disorder prediction 277 300 - -
Pvu7g2314 468 MobiDBLite consensus disorder prediction 306 322 - -
Pvu7g2314 468 PANTHER DAUER UP-REGULATED-RELATED 388 462 - -
Pvu7g2314 468 PANTHER DAUER UP-REGULATED-RELATED 1 157 - -
Pvu7g2314 468 PANTHER DAUER UP-REGULATED-RELATED 138 252 - -
Pvu7g2314 468 MobiDBLite consensus disorder prediction 222 405 - -
Pvu7g2314 468 Coils Coil 7 27 - -
Pvu7g2314 468 Pfam Late embryogenesis abundant protein 163 206 IPR004238 -
Pvu7g2314 468 Pfam Late embryogenesis abundant protein 141 184 IPR004238 -
Pvu7g2314 468 Pfam Late embryogenesis abundant protein 185 227 IPR004238 -
Pvu7g2314 468 Pfam Late embryogenesis abundant protein 107 140 IPR004238 -
Pvu7g2314 468 Gene3D Apolipoprotein 191 341 - -
Pvu7g2314 468 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 388 462 - -
Pvu7g2314 468 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 1 157 - -
Pvu7g2314 468 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 138 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2314 Pvu-Chr7 46501431 46503473 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2314 - - pvu:PHAVU_007G225200g 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1912 1 44967041 44968263 Pvu7g2314 7 46501431 46503473 PCT