Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2280 ATGGCCGGCGATATTAAGGAGGGGAGAGCTTTGGCAATAGGGTATTCTTTTCTTTTGCTGCTATTGACTTCACTTCTTTGTAGCAGTGAGGGGTTGAACACTGAGGGGCAAATCTTGCTAGAGCTTAAGAATGGACTTCATGATAAATCTAATGTTTTGGAAAATTGGAAGCGTACTGATGAAACCCCATGTGGATGGAAAGGTGTAAATTGCACTTATGATAAGTATAACAATCCAGTGGTTGCATCTCTTAATTTGACTTCAATGGATCTTTCTGGAACTCTAAATGCTTCTGGCATTGGGGGTCTGACCCATCTGACTTATCTCAATCTTGCCTACAATGGGTTGACTGGAAATATCCCCAAGGAGATTGGTGATTGCTTGAATTTGGAATATCTTTATTTGAACAATAATCAGTTTGAGGGCACTATTCCGGCTGAATTGGGTAAGCTGTCTGTTTTGAGAAGTTTGAATATTTACAACAACAAACTCACTGGTTTGATTCCACATGAGTTTGGGAACTTGTCTTCAATGGTTGAGCTAGTAGCCTATAGCAACTTTCTTGAGGGACCCCTGCCTCGTTCCATTGGAAATCTTAAGAATCTTGTAAATTTCAGAGCTGGGGCAAATAACATTACTGGTAACTTGCCAAAGGAAATTGGTGGATGTAAGAGATTAATGCGTCTAGGTCTTGCACAAAATCAGATAGGAGGGGAAATACCAAGGGAGATTGGGATGCTTGCCAGCTTGAAAGAATTGGTTTTATGGGGAAACCAGCTGTCAGGACCTATTCCTAAAGAGATTGGGAATTGTAGCAGTCTTGAGAACATTGCTATATATGGGAATTATCTTATTGGACCTTTACCTAAGGAAATTGGCAACCTCAAATCCTTGAGGTGGCTGTATGTTTACAGAAACAAGTTGAACGGAACCATTCCAGGGGAAATTGGAAATCTTACTTCATGTTTAGACATTGATTTCTCAGAGAACTCTTTAGTAGGTAGTATCCCTTCAGAGTTTGGTAAAATAAGTGATCTAAGTTTGCTTTTTCTCTTTGAGAACCATCTAACTGGTGTTATACCAAATGAGTTAAGTAGCTTGAAAAACCTGTCAAAGCTAGACCTGTCAATAAATAATCTCACAGGGCCAATTCCATTTGGCTTCCAATATTTGACTAAAATGAAGCAGTTGCAACTTTTTGACAACTCCCTGAGTGGTATTATTCCCCCGGGACTTGGACTTCATAGTCCCCTTTGGGTTGTTGACTTTTCTGACAACAACTTGACAGGAAGAATACCTCTTCATCTGTGCCGAAATTCCAGTTTGATGTTGTTGAATCTTGCAGCTAATCATCTTTATGGAAATATACCAACAGGTATACTAAACTGTAAATCATTGGCACAGTTGTTGATACTTGGAAACAGGCTTACTGGAAGCTTCCCTTTAGAATTGTGTAAGCTGGAGAACTTGACTGCCATTGATTTGAATGAAAACAGGTTCAGTGGTACACTCCCTGATGATATTGGGAACTGCCACAGACTGCAAAGGCTTCATATTGCCAACAATTACTTCACATTGGAGTTGCCTAAGGAAATAGGTAATCTCTCTCAATTGGTGACCTTTAATGTTTCGTCAAATCTTTTCACTGGAACAATCCCACCTGAAATTTTTTCGTGTCAAAGGCTACAAAGGCTTGATCTCAGCCAGAATAACTTTTCTGGTTCCTTGCCTGATGAGATTGGAACACTTCAGCACTTGGAGATTCTCAAGGTTTCAAACAATAGGCTGTCTGGATGTATTCCTGCAGCATTAGGCAATCTGTCTCATTTGAACTGGTTGTTGATGGATGGCAACTATTTTTTCGGCGAAATACCTCCTCAGTTAGGTTATCTTTCAAGCTTGCAAATTGCAATGGATCTCAGTTACAATAACCTTTCGGGAAAAATACCAGTTCAGCTTGGCAGTCTCAACATGCTTGAATATCTCTATCTCAATAACAACCATTTGGATGGTGAAATTCCCAGCACATTTGAAGAGCTATCAAGCTTGTTGGGATGCAATTTCTCATTCAATAACCTCTCTGGGCCTATTCCTTCCACTAAAATTTTCCGAAGTATGGCTTTGAGCAGCTATATTGGTGGTAAGAATGGCCTCTGTGGTGCACCTCTCGGTGACTGCAGCACCAATTCTGCTTCTCACTCTGATACTTCAGGGAAAAGTTTTGATGCTCCTCGAGCTAAAATAGTCATGATCATTGCAGCTTCTGTTGGAGGTATTTCACTCATTTTCATCTTAGTTATTTTATATTTTATGAGACGTCCTCGGGAATCAATTGATTCCTTTGGAGGCACTGAGGCTCCCTCCCCAGATTCAGATATCTATTTCCCTCCAAAGGAAGGTTTGACATTCCATGATCTAGTTGAAGCTACAAAAAGATTTCATGAAAGCTATGTTATTGGTAAGGGAGCATGTGGAACCGTTTATAAGGCAGTGATGAAATCTGGTGAGACCATTGCTGTTAAGAAGTTAGCATCAAACAGGGAAGGGAACAACATTGAGAATAGCTTCAGAGCTGAAATATCAACTCTGGGAAGAATAAGGCATCGGAACATAGTGAAACTGTATGGCTTTTGCTACCACCAGGGTTCCAATCTCCTGCTATATGAGTACATGGAAAGAGGTAGCTTAGGTGAACTATTGCATGGTTCTGCATCTAGTTTGGAGTGGTCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTTGCTTACTTGCATCATGACTGTAAACCAAAGATTATCCACCGCGATATAAAATCTAACAACATTCTACTGGATGAAAATTTTGAGGCTCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCCCAGTCAAAATCAATGTCTGCTGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATATACCATGAAGGTCACAGAAAAGTGTGACATCTACAGTTATGGTGTTGTGCTCTTGGAATTGCTCACTGGAAGAACACCAGTTCAGCCACTAGAACAAGGAGGAGATCTTGTCTCATGGGTGAGGAACTATATCAAGGATCACAACAATTCTCTGACACCGGAGATACTTGATACTCGTGTAGATCTGGAAGACCAAACCACAGTGAATCACATGCTCACTGTTTTGAAGCTTGCTTTAGTATGCACAAGTGTGTCTCCTTCAAAGAGGCCATCAATGAGGGATGTTGTGAAGATGCTTATTGAGTCCAATGAGAGAGAAGGAAACTTGACACTCACTCAAACATACCATGATCTTCCTTCCAAAGATGGCTTGTGA 3336 0.4068 MAGDIKEGRALAIGYSFLLLLLTSLLCSSEGLNTEGQILLELKNGLHDKSNVLENWKRTDETPCGWKGVNCTYDKYNNPVVASLNLTSMDLSGTLNASGIGGLTHLTYLNLAYNGLTGNIPKEIGDCLNLEYLYLNNNQFEGTIPAELGKLSVLRSLNIYNNKLTGLIPHEFGNLSSMVELVAYSNFLEGPLPRSIGNLKNLVNFRAGANNITGNLPKEIGGCKRLMRLGLAQNQIGGEIPREIGMLASLKELVLWGNQLSGPIPKEIGNCSSLENIAIYGNYLIGPLPKEIGNLKSLRWLYVYRNKLNGTIPGEIGNLTSCLDIDFSENSLVGSIPSEFGKISDLSLLFLFENHLTGVIPNELSSLKNLSKLDLSINNLTGPIPFGFQYLTKMKQLQLFDNSLSGIIPPGLGLHSPLWVVDFSDNNLTGRIPLHLCRNSSLMLLNLAANHLYGNIPTGILNCKSLAQLLILGNRLTGSFPLELCKLENLTAIDLNENRFSGTLPDDIGNCHRLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFTGTIPPEIFSCQRLQRLDLSQNNFSGSLPDEIGTLQHLEILKVSNNRLSGCIPAALGNLSHLNWLLMDGNYFFGEIPPQLGYLSSLQIAMDLSYNNLSGKIPVQLGSLNMLEYLYLNNNHLDGEIPSTFEELSSLLGCNFSFNNLSGPIPSTKIFRSMALSSYIGGKNGLCGAPLGDCSTNSASHSDTSGKSFDAPRAKIVMIIAASVGGISLIFILVILYFMRRPRESIDSFGGTEAPSPDSDIYFPPKEGLTFHDLVEATKRFHESYVIGKGACGTVYKAVMKSGETIAVKKLASNREGNNIENSFRAEISTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGELLHGSASSLEWSTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVSWVRNYIKDHNNSLTPEILDTRVDLEDQTTVNHMLTVLKLALVCTSVSPSKRPSMRDVVKMLIESNEREGNLTLTQTYHDLPSKDGL* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2280 1111 Gene3D Ribonuclease Inhibitor 354 461 IPR032675 -
Pvu7g2280 1111 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1097 - -
Pvu7g2280 1111 ProSiteProfiles Protein kinase domain profile. 813 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2280 1111 SUPERFAMILY L domain-like 473 724 - -
Pvu7g2280 1111 SMART serkin_6 813 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2280 1111 SMART LRR_typ_2 656 679 IPR003591 -
Pvu7g2280 1111 SMART LRR_typ_2 151 174 IPR003591 -
Pvu7g2280 1111 SMART LRR_typ_2 295 319 IPR003591 -
Pvu7g2280 1111 SMART LRR_typ_2 391 415 IPR003591 -
Pvu7g2280 1111 SMART LRR_typ_2 535 559 IPR003591 -
Pvu7g2280 1111 SMART LRR_typ_2 103 127 IPR003591 -
Pvu7g2280 1111 SMART LRR_typ_2 247 271 IPR003591 -
Pvu7g2280 1111 SMART LRR_typ_2 583 607 IPR003591 -
Pvu7g2280 1111 SMART LRR_typ_2 367 390 IPR003591 -
Pvu7g2280 1111 SMART LRR_typ_2 487 511 IPR003591 -
Pvu7g2280 1111 SUPERFAMILY L domain-like 52 393 - -
Pvu7g2280 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Pvu7g2280 1111 SUPERFAMILY L domain-like 354 479 - -
Pvu7g2280 1111 Gene3D Transferase(Phosphotransferase) domain 1 891 1104 - -
Pvu7g2280 1111 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Pvu7g2280 1111 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 4 1097 - -
Pvu7g2280 1111 Pfam Protein kinase domain 814 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2280 1111 Gene3D Ribonuclease Inhibitor 464 730 IPR032675 -
Pvu7g2280 1111 Gene3D Ribonuclease Inhibitor 205 351 IPR032675 -
Pvu7g2280 1111 Pfam Leucine rich repeat 561 619 IPR001611 GO:0005515
Pvu7g2280 1111 Pfam Leucine Rich Repeat 129 151 IPR001611 GO:0005515
Pvu7g2280 1111 Pfam Leucine Rich Repeat 154 175 IPR001611 GO:0005515
Pvu7g2280 1111 Pfam Leucine Rich Repeat 659 680 IPR001611 GO:0005515
Pvu7g2280 1111 Gene3D Ribonuclease Inhibitor 32 195 IPR032675 -
Pvu7g2280 1111 SUPERFAMILY Protein kinase-like (PK-like) 792 1086 IPR011009 -
Pvu7g2280 1111 Gene3D Phosphorylase Kinase; domain 1 788 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2280 Pvu-Chr7 46130156 46135155 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2280 32 1088 Receptor kinase-like Gene Family AT5G56040 37.873 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu7g2280 Pkinase 5.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2280 - - gmx:100805792 1950.25