Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2212 ATGGCTTCAATCTTTTCACCTCTCACCATAATCTTCTTCTTCCTCCTAGTCCTTTGGGGTGGCGAGGCACGTGACCCTTTTGCGTGTGACCCAAAGAACGCCGCCACAAGCAGCTTACCCTTTTGCAAGGCGTCGCTGGCAATAGCAGAAAGAGTGAAGGACCTGATTGGAAGGTTGACAATGGAAGAAAAGGTGGGCTTGCTAGTGAACAATGCTGCGGCAGTTCCACGGCTTGGAATCAAAGGGTATGAGTGGTGGTCGGAGGCACTGCATGGGGTCTCAAATGTGGGCCCCGGAACCAAGTTTGGCGGCCAGTTTCCCGCCGCCACTAGCTTCCCTCAAGTCATCACCACCGCTGCTTCTTTCAATGCTTCTTTGTGGGAAGCTATTGGACGGGTGGCCTCAGACGAAGCAAGAGCAATGTACAATGGGGGAACGGGTGGGCTTACATACTGGAGCCCGAACGTGAACATTTTTAGAGACCCACGGTGGGGCCGCGGGCAGGAGACTCCCGGCGAGGACCCAATACTTGCCGGAAAATATGCGGGCAGTTACGTGAGGGGACTGCAGGGGAGCGACGGTAAGCGGTTGAAGGTGGCGGCTTCTTGCAAACACTTTACGGCTTATGACCTTGATAATTGGAAGGGTGTGGATCGGTTTCACTTCAATGCAGAGGTTAGCAAGCAGGATATGGAGGATACGTTCAACGTGCCATTCCGAATGTGCGTGAAGGAAGGAAAGGTGGCGAGTGTGATGTGTTCTTACAATCAGGTTAACGGCGTTCCTACCTGTGCAGACCCCATCCTTCTAAACACAACTCTTCGAGGCCTGTGGGGTCTTAACGGGTACATTGTATCAGACTGTGACTCTGTTGGAGTTTTCTACAATGCCCAACATTACACATCTACGCCGGAACAAGCTGCTGCTGCTGCCATTCAAGCAGGTTTGGATTTGGATTGTGGGCCTTTTCTAGCCCAGCACACGCACAATGCTGTCAAAAAAGGCCTGTTGAGAGAAGCTCATGTGAATGGGGCCTTGGCGAACACGTTGACGGTCCAAATGAGATTAGGGATGTATGATGGTGAGCAACCCGGTCATCCGTATGCCAATCTTGGGCCAAAAGATGTCTGCAGCCCAAGTAATCAAGACCTTGCCCACGAAGCCGCAAGACAAGGAATTGTCCTACTTAAAAACAAAGGCCCTTCTTTGCCTCTCTCCACAAGGCGTCACCGCACCCTGGCTGTTATTGGGCCCAATTCGAATGCCACTGTCACAATGATTGGAAACTATGCAGGTATTGCTTGCGGATACACTAGCCCTCTGCAGGGAATAGGGAAATACACCAAGACTATTCACGAGCTGGGTTGTTCAAATGTGGCTTGCACAGATGACAAGCAATTCGGGAGAGCTATAAATGCAGCCCAGCAAGCAGATGCGACTGTGCTGGTGATGGGCCTGGATCAGTCCATCGAGGCTGAAACTGTGGACAGGGTGGGCCTGCTTCTTCCTGGTCACCAACAAGACCTTGTGTCGAAAGTAGCATCTGCCTCCAAGGGCCCAACAATTTTGGTAATAATGTCCGGTGGGCCTGTGGATATAACTTTCGCAAAGAATGATCCTCGAATCCAAGGAATTTTTTGGGCCGGTTATCCCGGTCAAGCTGGTGGTGCTGCCATTGCAGATATCTTGTTTGGAACATCAAGCCCTGGAGGGAAGCTACCTATGACATGGTACCCAGAAGGGTACGTTGAAAAGTTGGCAATGACAAATATGGCAATGCGATCAAAGCGATCGAAAGGGTACCCAGGAAGAACCTACAGATTTTACAGTGGGCCTGTGGTGTATTCATTTGGTTACGGATTGTATTACACGCATTTTGTTCATACATTGGTAAGTGCACCCAAAGTGGTATCAATTCCCGTGGATGGGCACCGGCACAACAATAGCTCCAACATTGCCAACAATGCAGTTAAAGTGACACATGCCCGATGTGCCAAGCTTTCTATTAGCCTTCAGGTGGACGTTAAAAATGTTGGCTCCAGAGATGCCACGCACACGCTGTTAGTCTTCTCCGCACCACCTGCAGGTAATGCTCAATGGGCTCCACACAAGCAACTTGTGGCTTTTCACAAACTCCATCTTCCTGCCAAGGCCCAAGACCGAGTGCGTATCAACATTCACGTTTGCAAGCTCCTCAGTGTGGTTGACAGGTCCGGGACTAGGAGAGTTCCAATGGGCTTGCACACTCTTCACATTGCTGATATTAAACACACTCTCACACTTCACCCACACATCAACTCTTGA 2304 0.5056 MASIFSPLTIIFFFLLVLWGGEARDPFACDPKNAATSSLPFCKASLAIAERVKDLIGRLTMEEKVGLLVNNAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGQFPAATSFPQVITTAASFNASLWEAIGRVASDEARAMYNGGTGGLTYWSPNVNIFRDPRWGRGQETPGEDPILAGKYAGSYVRGLQGSDGKRLKVAASCKHFTAYDLDNWKGVDRFHFNAEVSKQDMEDTFNVPFRMCVKEGKVASVMCSYNQVNGVPTCADPILLNTTLRGLWGLNGYIVSDCDSVGVFYNAQHYTSTPEQAAAAAIQAGLDLDCGPFLAQHTHNAVKKGLLREAHVNGALANTLTVQMRLGMYDGEQPGHPYANLGPKDVCSPSNQDLAHEAARQGIVLLKNKGPSLPLSTRRHRTLAVIGPNSNATVTMIGNYAGIACGYTSPLQGIGKYTKTIHELGCSNVACTDDKQFGRAINAAQQADATVLVMGLDQSIEAETVDRVGLLLPGHQQDLVSKVASASKGPTILVIMSGGPVDITFAKNDPRIQGIFWAGYPGQAGGAAIADILFGTSSPGGKLPMTWYPEGYVEKLAMTNMAMRSKRSKGYPGRTYRFYSGPVVYSFGYGLYYTHFVHTLVSAPKVVSIPVDGHRHNNSSNIANNAVKVTHARCAKLSISLQVDVKNVGSRDATHTLLVFSAPPAGNAQWAPHKQLVAFHKLHLPAKAQDRVRINIHVCKLLSVVDRSGTRRVPMGLHTLHIADIKHTLTLHPHINS* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2212 767 PANTHER SUGAR HYDROLASE-RELATED 3 762 IPR044993 GO:0009044|GO:0045493
Pvu7g2212 767 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 3 762 - -
Pvu7g2212 767 SUPERFAMILY (Trans)glycosidases 39 392 IPR017853 -
Pvu7g2212 767 Pfam Glycosyl hydrolase family 3 C-terminal domain 393 623 IPR002772 GO:0004553|GO:0005975
Pvu7g2212 767 Gene3D - 51 366 IPR036962 GO:0004553|GO:0005975
Pvu7g2212 767 PRINTS Glycosyl hydrolase family 3 signature 112 131 IPR001764 GO:0004553|GO:0005975
Pvu7g2212 767 PRINTS Glycosyl hydrolase family 3 signature 199 215 IPR001764 GO:0004553|GO:0005975
Pvu7g2212 767 PRINTS Glycosyl hydrolase family 3 signature 273 291 IPR001764 GO:0004553|GO:0005975
Pvu7g2212 767 Pfam Fibronectin type III-like domain 687 753 IPR026891 -
Pvu7g2212 767 Gene3D - 380 624 IPR036881 GO:0004553|GO:0005975
Pvu7g2212 767 Gene3D Immunoglobulins 647 765 IPR013783 -
Pvu7g2212 767 Pfam Glycosyl hydrolase family 3 N terminal domain 105 350 IPR001764 GO:0004553|GO:0005975
Pvu7g2212 767 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 393 626 IPR036881 GO:0004553|GO:0005975
Pvu7g2212 767 SMART Fn3_like_2 685 756 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2212 Pvu-Chr7 45408709 45413072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2212 8 762 Glycoside Hydrolase AT1G02640 69.881 0.0 1116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2212 - - gmx:100798630 1379.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2212 7 45408709 45413072 Pvu7g2212 7 45408709 45413072 ECH
Pvu1g2195 1 47564296 47569362 Pvu7g2212 7 45408709 45413072 PCT