Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2062 ATGGACCAGTTTCAATCAACCATCACCAATAATGCTCAAATGCCCAACTCTCAACCTTCCAACTCCAACAATGGCGAACCACTCTATGAAGACTTTGACAGCACCTGTTCCACACCTTACGTCAGTGCCCCTTCAAGTCCCGGTCGTGGACCGCTCCCGCTCCCAGGCTTCTTCTACAGTGCTCCCGCCAGTCCAATGCACTTCGCCATAACCGCTGCATCCTCCTACGACAAGACTCCCTCTTCCGCGCCAATGGGTTACGAGTTCGAATTCTCGGCCAGGTTCGGCTCAGCCGGTTCTGCCGGTTCCGGTTCCATGAGCTCTGCTGACGAGTTGTTCCTGAATGGTCAGATCCGTCCCATGAAGCTCTCGAGCCACCTTGAACGCCCCCAGGTTCTCGCACCCTTGTTGGATCTGGAAGGAGAAGAGGAGGAAGAGGAAGCCGAGGCGGTTAGCGTTAGTGTGGTCCGAGGCAGAGATCTGCGGCTGCGGGACAAGTCTGTTCGGAGGAGAACCAGATCCATGTCCCCTCTCCGAAGCAACACGCCTCTGGAGTGGGCAGAAAACGAAGAGGATCATATTGTTGGCGGGGATCACGACAATAGCGTGAGCTCAGGGAAGCAAATCGAGGTTAGTTCCTCGGAAGCTGAGAAACGAATGGAGAACGCGGAAGATGGTTTGGAGACAACTCATTCGGTATCAGGTTCGGCTTCTTCCTCTCGCTCTTCTTCGGCTGGGAGAAGCTCGAAGCGTTGGGTTTTCCTGAAGGACTTTCTCCGAAGCAAAAGCGAAGGAAGGAGTAACAACAAGTTCTGGTCCACCATTTCCTTCTCCCCAACCACCAAAGACAGGAAACCCACCACTTCCAGTGCCCAAACTCTCAATGTCCCAGCAAACACCAAGACCGGGCCTTCTTCTTCTTCTTCCGAAGCCACGCACAAGTCCAAAGGAAGTAGCTCTCAGGGCTGGGCTCGGAGAATGAGCGGGAAGCCCACCAACGGTGTTGGGAAGAGACGCGTGCCACCTTCGCCGCACGAGTTGCACTATAAAGCTAACCGGGCACAAGCTGAGGAGTTGAGGAAAAAGACCTTTTTGCCCTACAGGCAGGGTCTGCTTGGGTGTTTGGGCTTTAGTTCTAAGGGTTACGGTGCCATGAATGGCTTGGCTAGAGCCCTAAACCCTGTTTCCTCCAGAAACCACGTGGTGTGGGGAGCCCTGATAGTTGGTTCAGGCCCCATGATAACTGTGCAAATACAATTCGGCAACTTGAAAGATGCCCGTGATTTTGTTTGCATCTCATGCGTCCCTCAGTCTTTGGTTGCTTGTGCAAATTGCATTGAGATGGGAGTATTGCGGTTTATTTAG 1365 0.5333 MDQFQSTITNNAQMPNSQPSNSNNGEPLYEDFDSTCSTPYVSAPSSPGRGPLPLPGFFYSAPASPMHFAITAASSYDKTPSSAPMGYEFEFSARFGSAGSAGSGSMSSADELFLNGQIRPMKLSSHLERPQVLAPLLDLEGEEEEEEAEAVSVSVVRGRDLRLRDKSVRRRTRSMSPLRSNTPLEWAENEEDHIVGGDHDNSVSSGKQIEVSSSEAEKRMENAEDGLETTHSVSGSASSSRSSSAGRSSKRWVFLKDFLRSKSEGRSNNKFWSTISFSPTTKDRKPTTSSAQTLNVPANTKTGPSSSSSEATHKSKGSSSQGWARRMSGKPTNGVGKRRVPPSPHELHYKANRAQAEELRKKTFLPYRQGLLGCLGFSSKGYGAMNGLARALNPVSSRNHVVWGALIVGSGPMITVQIQFGNLKDARDFVCISCVPQSLVACANCIEMGVLRFI* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2062 454 MobiDBLite consensus disorder prediction 269 327 - -
Pvu7g2062 454 Pfam Protein of unknown function (DUF1645) 109 366 IPR012442 -
Pvu7g2062 454 MobiDBLite consensus disorder prediction 212 226 - -
Pvu7g2062 454 MobiDBLite consensus disorder prediction 1 47 - -
Pvu7g2062 454 PANTHER STRESS RESPONSE NST1-LIKE PROTEIN (DUF1645) 22 394 - -
Pvu7g2062 454 MobiDBLite consensus disorder prediction 168 246 - -
Pvu7g2062 454 MobiDBLite consensus disorder prediction 1 44 - -
Pvu7g2062 454 PANTHER - 22 394 - -
Pvu7g2062 454 MobiDBLite consensus disorder prediction 269 347 - -
Pvu7g2062 454 MobiDBLite consensus disorder prediction 227 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2062 Pvu-Chr7 43999419 44001276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2062 - - gmx:100805542 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2334 1 48730751 48732561 Pvu7g2062 7 43999419 44001276 ECH
Pvu7g2062 7 43999419 44001276 Pvu7g2062 7 43999419 44001276 ECH
Pvu1g2334 1 48730751 48732561 Pvu7g2062 7 43999419 44001276 PCT