Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1709 ATGATGAAGAATCAACCGTCACAGTGGTGGTGGCTTGAGAGCCACAATAACACAAGACGATCCCCTTGGCTTCAATCCACTCTCACAGAGCTAAATGAGAAGACAAAGGCAATGTTAAAACTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTATTACAAGAAGAGACCACAGCTTGTGAGCATGGTTGAAGATTTCTATAGGACACATCGATCATTAGTTGAGCGGTATGATCAAGTCACTGGAATTCGTCAGCAGAAGACTGGAGGATCCCCCTTTTCTCCACTCAAGCATCATCAACCAGAGAAGTTGATGAGTTTTACTGATGACAATTATGATAGCTATTATGAGAGTTGTGATGTGGAGGAGTCTGGGGAATCTGAAATTGACGATCCTGAGCAAGAAGAGGAAGAGGATACAAAATTCAATAACAATGCAGAACTGGAGGAAGTTCAGTTTGTGGCTGCAAATGATGTGATGGAAATTGAGAGACTTGGTGAAGAGAACAAGGATCATAACGATCACAACAAGCAGAAATATAACATTTACGAAGCAGTGATGTTGAGGGAAGAAATAGAGCAACTCAGAAAAGAGAACAGAGTTCAGAAGGATGAACTCAACCCGAAAAGCATCATTTGTGGTGAATTGTTGATGCTGAGGGAAGAAATAGGACGACTCGGAAAGGAGAACAGAGCGGAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGCAATGATGTTGAGGGAAGAAATAGAACAACTTGGTAAAGAGAACAGAGTTCTGAAGGATGAAATAAATCAGAAAAGTATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATAGAGCAACTCAGAAAAGAGAATAGAGGGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGCAATGCTGTTGAGGGAAGAAATAGAACAACTCGGTAAGGAGAATAGAGTTCTGAAGGATGAACTAAATCAGAAAAGTATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATAGAGCAACTCAGAAAAGAGAATAGAGAACATAAGGATGAACTCAACCAGAAAGATAACATTTGCGGTGAAATAATGATGTTGAGGGAAGAAATAGAACAATTGGGAAAAGAGAATGGAGCGCTGAAGGATGAACTCAACCAGAAATATATCATTTGTGGAGAAGTAATGATGTTGAGGGAAGAAATACAACAACTCAGAAAAGAGAATAGAGGGCAGAAGGATGAACTCGACCAGATAGATATCAATAGTGAAGTAACGATGTCGAGGGAAGAAATTGAAGTATACATAAAAGAGAATAGAGTCAAGAATGATGAACTCAAGCCGAAAGGTAACGTTTGTGGTGAAGTAGTGATGTTGAGGGAAGAAATAGAACGACTCAGAAAAGATGAAAGAGCACAAAAAAGTACCCTTTGTGGTGAAGTGATGAAGTTAAAGCAAGAGAATAGCGCACAGAAGGACCATCTCAAGAAAAAAGACCAAGAGAAAATAGAGGTAATAAGACACCTGAGTTTAGCTATAGATATGCTGAAGCAGGAGAATGTAAAGATGAGAAGCTTCATTGCTAAGGAATCTACCAACAAATGGAAGAATCCGTTTGGATTTAAGAATTTCATGGGATCATTATCGGGGCAGTTGTTTAATGGACTTACAAAGAATCAACCTAGTCTTGTAGCTCTCTAG 1734 0.3933 MMKNQPSQWWWLESHNNTRRSPWLQSTLTELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLVERYDQVTGIRQQKTGGSPFSPLKHHQPEKLMSFTDDNYDSYYESCDVEESGESEIDDPEQEEEEDTKFNNNAELEEVQFVAANDVMEIERLGEENKDHNDHNKQKYNIYEAVMLREEIEQLRKENRVQKDELNPKSIICGELLMLREEIGRLGKENRAEKDELNQKDIICGEAMMLREEIEQLGKENRVLKDEINQKSIICGEVMMLREEIEQLRKENRGQKDELNQKDIICGEAMLLREEIEQLGKENRVLKDELNQKSIICGEVMMLREEIEQLRKENREHKDELNQKDNICGEIMMLREEIEQLGKENGALKDELNQKYIICGEVMMLREEIQQLRKENRGQKDELDQIDINSEVTMSREEIEVYIKENRVKNDELKPKGNVCGEVVMLREEIERLRKDERAQKSTLCGEVMKLKQENSAQKDHLKKKDQEKIEVIRHLSLAIDMLKQENVKMRSFIAKESTNKWKNPFGFKNFMGSLSGQLFNGLTKNQPSLVAL* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1709 577 Coils Coil 282 309 - -
Pvu7g1709 577 Coils Coil 406 433 - -
Pvu7g1709 577 Coils Coil 492 512 - -
Pvu7g1709 577 Coils Coil 251 271 - -
Pvu7g1709 577 Coils Coil 344 395 - -
Pvu7g1709 577 MobiDBLite consensus disorder prediction 122 142 - -
Pvu7g1709 577 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 7 88 IPR011684 GO:0003779
Pvu7g1709 577 PANTHER PROTEIN NETWORKED 3A-RELATED 7 336 - -
Pvu7g1709 577 PANTHER PROTEIN NETWORKED 3A-RELATED 444 576 - -
Pvu7g1709 577 Coils Coil 313 333 - -
Pvu7g1709 577 Coils Coil 189 209 - -
Pvu7g1709 577 PANTHER PROTEIN NETWORKED 4A 444 576 - -
Pvu7g1709 577 PANTHER PROTEIN NETWORKED 4A 7 336 - -
Pvu7g1709 577 MobiDBLite consensus disorder prediction 122 146 - -
Pvu7g1709 577 Pfam KIP1-like protein 9 82 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1709 Pvu-Chr7 39805273 39808604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1709 - - pvu:PHAVU_007G166300g 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1709 7 39805273 39808604 Pvu7g1709 7 39805273 39808604 ECH
Pvu1g2097 1 46799669 46802798 Pvu7g1709 7 39805273 39808604 PCT