Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1528 ATGCTCTCATTTCATATGCACTTTCTTCGAACAGTCCCTCTCCTTTTCACTCTCTCACCCTGCATTTATAATAGCAGCATCATTCTTCTTTCTGCTTACACTTTACCTTACTTACTCGCCTTTTCCTTCATGGCTCTGATACCTCTGTTTGCTATTTTATTCTTTATGGCCTCCCCAAGCAATGCTTACTGGCCACCTTCACCTAGTTACAGGCCAAGTTCCAAATTCAGGCCTGTGAACTTCTACAAAGGGTTCAGAAATCTTTGGGGTCCTCAGCACCAAAGCATTGACCAAAATGCATTAACATTATGGCTTGATAGAACCTCAGGAAGTGGCTTCAAGTCAGTTCGTCCATTTCGATCCGGGTACTTTGGTGCTTCCATTAAGCTCCATCCTGGCTATACTGCAGGAGTTATCACAGCTTTCTATCTTTCTAACAACGAGGCACATCCGGGCTTCCATGATGAAGTGGACATTGAGTTTCTTGGGACGACATTTGGAAAGCCTTACACTTTACAGACCAATGTTTATATAAGAGGAAGTGGGGATGGCACAATTATTGGCAGAGAAATGAAGTTCCACCTTTGGTTTGATCCTACACAAAACTTTCATCACTATGCTATACTTTGGAGTCCTAAGGAAATAATATTCCTTGTGGATGATATTCCCATAAGGAGGTACCCAAGAAAGAGTGCTGAAACATTTCCACTACGACCAATGTGGCTTTATGGTTCAATATGGGATGCCTCATCATGGGCAACAGAAGATGGAAAGTACAAAGCTGATTACAGATACCAACCTTTTGTTGCAAGGTACACTAACTTCAAGGTTGGTGGTTGCTCAGCCTATGCCTCTCGTTGGTGCCGTTTAGCCTCAGCCTCACCATATCGCTCTGGTGGCTTGACCAGACGCCAATACTGGACCATGAGAGGGGTGCAAAAATACCACATGGTCTATAACTATTGCCAAGATCCCAAAAGAGACCACAGACTAACACCTGAGTGTTGGGGGTAA 1014 0.4379 MLSFHMHFLRTVPLLFTLSPCIYNSSIILLSAYTLPYLLAFSFMALIPLFAILFFMASPSNAYWPPSPSYRPSSKFRPVNFYKGFRNLWGPQHQSIDQNALTLWLDRTSGSGFKSVRPFRSGYFGASIKLHPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGTIIGREMKFHLWFDPTQNFHHYAILWSPKEIIFLVDDIPIRRYPRKSAETFPLRPMWLYGSIWDASSWATEDGKYKADYRYQPFVARYTNFKVGGCSAYASRWCRLASASPYRSGGLTRRQYWTMRGVQKYHMVYNYCQDPKRDHRLTPECWG* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1528 337 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 45 336 - -
Pvu7g1528 337 Gene3D - 61 335 - -
Pvu7g1528 337 SUPERFAMILY Concanavalin A-like lectins/glucanases 103 323 IPR013320 -
Pvu7g1528 337 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 294 335 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Pvu7g1528 337 Pfam Glycosyl hydrolases family 16 83 264 IPR000757 GO:0004553|GO:0005975
Pvu7g1528 337 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 60 272 IPR000757 GO:0004553|GO:0005975
Pvu7g1528 337 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 45 336 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1528 Pvu-Chr7 36632876 36635463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1528 44 335 Glycoside Hydrolase AT3G44990 63.481 9.94e-135 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1528 K08235 - gmx:100813742 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1528 7 36632876 36635463 Pvu7g1528 7 36632876 36635463 ECH
Pvu1g1864 1 44448347 44450835 Pvu7g1528 7 36632876 36635463 PCT