LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g1523	ATGGAAACCTTCCTCTTCACCTCAGAATCTGTAAACGAGGGACACCCCGACAAGATCTGTGACCAGGTTTCTGATGCCATCCTCGATGCTTGTCTGGAGCAAGACCCAGAGAGCAAGGTTGCCTGCGAAACCTGCACAAAAACCAACATGGTGATGGTGTTTGGTGAGATCACAACCAAGGCCAAGGTGAACTACGAGAAAATAGTTCGCGACACTTGCCGAGGCATTGGGTTCGTGTCTGCTGATGTTGGTCTGGATGCTGATAAGTGCAACGTTCTTGTCAACATTGAGCAACAGAGCCCTGACATTGCCCAGGGAGTTCACGGTCACTTGTCCAAAAAGCCGGAGGAAATTGGAGCGGGTGACCAAGGGCACATGTTTGGGTATGCCACAGACGAAACAGCTGAACTAATGCCACTCACTCATGTGCTTGCTACCAAACTTGGTGCCAAGCTGACGGAAGTGAGAAAGAACAAGACATGCGCGTGGCTTAGGCCTGATGGTAAAACCCAAGTGACTGTTGAGTACAGGAATGATGGTGGGGCCATGGTCCCTATCCGTGTGCACACAGTCCTCATCTCGACCCAACATGATGAAACCGTCACAAATGAACAAATTGCAAAGGATTTGAAAGAGCATGTGATAAAGCCTGTGATCCCAGCTGAATACCTGGATGACAAGACCATCTTCCACCTCAACCCTTCAGGTAGGTTTGTGATTGGAGGACCCCATGGAGACGCAGGACTCACTGGGAGGAAGATCATCATTGATACCTATGGTGGGTGGGGTGCTCATGGTGGAGGTGCGTTCTCAGGCAAGGATCCAACCAAGGTTGATAGGAGCGGTGCATACATTATGAGGCAAGCCGCAAAGAGTGTGGTAGCTTCTGGTCTTGCACGTCGCTGCATTGTGCAGGTTTCCTACGCAATCGGAGTGCCTGAGCCATCATCTGTGTTTGTGGATACCTATAAAACAGGGAAGATTTCTGACAGTGATATTCTGGCTCTGATTAAGGAGAATTTTGACTTTAGGCCTGGAATGATTTCCATCAATCTTGACCTCATGAGGGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGCCATTTTGGACGAGATGATCCTGATTTCACATGGGAGACCGTCAAGATGCTCAAGCCCACTGCCTAA	1173	0.4953	METFLFTSESVNEGHPDKICDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDADKCNVLVNIEQQSPDIAQGVHGHLSKKPEEIGAGDQGHMFGYATDETAELMPLTHVLATKLGAKLTEVRKNKTCAWLRPDGKTQVTVEYRNDGGAMVPIRVHTVLISTQHDETVTNEQIAKDLKEHVIKPVIPAEYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIMRQAAKSVVASGLARRCIVQVSYAIGVPEPSSVFVDTYKTGKISDSDILALIKENFDFRPGMISINLDLMRGGNFRYQKTAAYGHFGRDDPDFTWETVKMLKPTA*	391

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g1523	390	CDD	S-AdoMet_synt	5	384	-	-
	Pvu7g1523	390	Gene3D	-	117	381	-	-
	Pvu7g1523	390	ProSitePatterns	S-adenosylmethionine synthase signature 1.	119	129	IPR022631	GO:0004478\|GO:0006556
	Pvu7g1523	390	ProSitePatterns	S-adenosylmethionine synthase signature 2.	266	274	IPR022631	GO:0004478\|GO:0006556
	Pvu7g1523	390	Gene3D	-	4	243	-	-
	Pvu7g1523	390	Pfam	S-adenosylmethionine synthetase, central domain	117	238	IPR022629	GO:0004478\|GO:0006556
	Pvu7g1523	390	TIGRFAM	metK: methionine adenosyltransferase	5	387	IPR002133	GO:0004478\|GO:0005524\|GO:0006556
	Pvu7g1523	390	PANTHER	S-ADENOSYLMETHIONINE SYNTHASE	1	390	-	-
	Pvu7g1523	390	Gene3D	-	11	280	-	-
	Pvu7g1523	390	PANTHER	S-ADENOSYLMETHIONINE SYNTHETASE	1	390	IPR002133	GO:0004478\|GO:0005524\|GO:0006556
	Pvu7g1523	390	PIRSF	MAT	1	390	IPR002133	GO:0004478\|GO:0005524\|GO:0006556
	Pvu7g1523	390	Pfam	S-adenosylmethionine synthetase, C-terminal domain	240	381	IPR022630	GO:0004478\|GO:0006556
	Pvu7g1523	390	SUPERFAMILY	S-adenosylmethionine synthetase	3	109	IPR022636	GO:0004478\|GO:0006556
	Pvu7g1523	390	Pfam	S-adenosylmethionine synthetase, N-terminal domain	4	101	IPR022628	GO:0004478\|GO:0006556
	Pvu7g1523	390	SUPERFAMILY	S-adenosylmethionine synthetase	115	239	IPR022636	GO:0004478\|GO:0006556
	Pvu7g1523	390	SUPERFAMILY	S-adenosylmethionine synthetase	240	387	IPR022636	GO:0004478\|GO:0006556
	Pvu7g1523	390	Hamap	S-adenosylmethionine synthase [metK].	2	390	IPR002133	GO:0004478\|GO:0005524\|GO:0006556

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu7g1523	Pvu-Chr7	36561087	36564446	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g1523	K00789		-	gmx:100816602	762.681

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g1860	1	44415066	44417571	Pvu7g1523	7	36561087	36564446	PCT