Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1192 ATGGACTCCATCATCGCTTCTTCGCCACTTCAATTTCCCCACCGCCCTCTCTTCACTTCTGTTCGCCCCATTCCTATCCGAACATTCATCGCCAATCACCGCCGAACACCACGAACCCCACTCTCACTCGCTCCCATCACCCTTACTCCACCATTCACTTCCGCTGCCAAGTCCACCACACTCGCACCCTCTCCTAGCGACGATGTTTTCTTGAAACACTTCGTTCGCGCGCTCTTCTGCTTTGCCGTTGGTTTCTCCGCGCTCGGCGCATTCCGCGCTCCTCCTCCCGCACTCGCAATTGCAGTTCCGTGGAGTCTATTAGGAAAGATAGGCGCCGAGAAAGAGAAAGAGAAAGCGAAGAGTCATCAGTATTCGGACTGTACCGATAAGTTGTTGGAGACGGTGTCATTTTTGTTGGGAGCCGTAGATGAAGCTAGGAAGGGGAATGGTGACGCGAGCGAGGTGGAGGCGGCGTTGAAGGCCGTGAAATCGAAGAAACAAGAGATGCGGAAAGAGATTGACGGGAGGCTCTACCCCGCGTTGAAGAAGCTGAGGAACGAAAAGAAGGCGTTGTGGAAACGGTCCGGGGAGATTCTCCGCGCTATATTGAAGGCGACGGCGGAGTACGATGGATTGAAGGCGAAGGCGGTGGCAAATGAGAAGGAGAAGGTAAGGATGAAGGAGTTGGAGGAGACTGTGGGAGAGATGGAGAATGAGTACAATGGGGTGTGGGAGAGAGTTGGGGAAATCGAGGACCAGATTTCGAGGGAGGAGACGCTGGCGTTGAGTTATGGAGTGAGGGAAATCAATTTCATAGAGAGGGAGTGTGAACAGCTAGTGGAGAGGTTGAAACAGGAAATTAGGCGCAAGGACTTCGAAAGTTTGCCTACTGGCTCGGTTACCAGGCTCTCAAAATCTGTCATTCAAAAAGATTTGGAAACTGTGCATAGAAAATATGCAGAACAAATAATTCTTCCTAGCATTTTGGATGTTGAAGATCTTGGGCCATTCTTTCACCAAGACTCTATTAATTTTGCCCATCGTTTAAAAAGAGTTCTTAAAGATTCCAGGGAGAAGCAGAGGAATTTAGAGGCTCAGATAAGGAAAAAAATGAAGAAGTTTGGCAAGGAAAAACGCAGTATTATTTACTCACCAGATGAAGATGTGGTTAAGGGCTTTCCTGAAGTTGAGTTAAAATGGATGTTTGGAAATAAGGAGGTTGTGCTTCCCAAAGCTGTTGGTCTCCATCTGTACCATGGTTGGAAGAAATGGCGTGAAGAAGCTAAGGCAAATTTAAAACAAAATTTAATAAAAGATGCTGAGTTTTGCAGACAATATGTGGCTGAAAGACAGGAACGGATTCTTTTGGACCGCGACAGAGTAGTTTCAAGGACTTGGTATAATGAAGGGAAGAAGAGATGGGAAATGGATCCAGTGGCTGTTCCTTATGCTGTCTCGAAAAAGTTAATAGAGTATGTTCGCATTAGGCATGATTGGGGTGCCATGTATATCGTATTAAAAGGGGAGGACAAAGAATTTTATGTAGACATAAAGGAATTTGAGATGCTTTTTGAAGATTTGGGGGGATTTGATGAACTTTATATGAAAATGCTTGCATGTGGTATTCCAACAGCGGTTCATCTAATGTGGATTCCTTTCTCTGAATTGAATATCCGCCAACAGTTTCTCTTGGTATTAAGAGTATCTCATGGGATTTGTAGTGGCTTGTGGAATTCTAGAGTTGTCACATATGCGAAAAATTGGATCTTTACCCAAATTAAGGATACAACTGATGACATAATGGTGGTGATGGGGTTTCCCATTGTGGAATTTTTGGTCCCATACCCGGTGAGAATACAATTGGGGATGGCTTGGCCAGAGGAAATATACCAGACAGTTGACACTACATGGTACTTGAAATGGCAATCAGAGGCAGAATCAAATTTTAAATCCAGACAATCAGCTGATGAGGATGAAGAAACTTCATGGTCTTTTTGGTTTTTGGTGAGAGCTGCTATATATGGATTTGTTTTGTTTCATGTGATCAAATTTATGAGGAGAAGACTTCCTAGCCTTCTTGGTTTTGGGCCTTTGCGAAGAGATCCAAATAGGCAGAAGTTGCGGCGAGTGAAGTATTACATTTCTCAAAAATTGAAAAAAATCAAGCAGAGGAGAAAGGATGGCATTGATCCCATAAAGACCGCATTTGAACAGATGAAGCGGGTGAAGAAACCACCAATACCATTGAAGAACTTTGCTAGTGTTGAGTCTATGAAAGAGGAAATCAATGAAGTTGTGGCATTTTTGCAGAATCCAAGCGCATTCCAGGAAATGGGTGCACAGGCGCCTCGGGGTGTTCTTATTGTAGGTGAGAGAGGTACTGGTAAGACTTCTCTAGCATTGGCTATTGCTGCTGAGGCTAAGGTTCCTGTTGTTGAAATTAAGGCCCAGCAATTGGAGGCTGGGCTGTGGGTTGGACAAAGTGCCTCCAATGTCCGTGAATTGTTTCAGACAGCAAGAGATCTGGCTCCTGTGATAATATTTGTGGAGGATTTTGATCTGTTTGCTGGTGTACGTGGTACATATATTCATACCAAAAATCAAGATCATGAAACTTTCATCAATCAACTCCTCGTGGAACTTGATGGATTTGAGAAACAGGATGGGGTTGTTTTGATGGCTACTACAAGAAATCTCAAGCAAATTGATGAGGCCTTGCAGAGGCCTGGTCGCATGGATAGAATATTTCATCTTCAAAGACCGACACAAGCCGAGAGAGAAAAAATATTATACTTGGCAGCAAAGGAAACCATGGATAATCAGCTTATTGATTATGTTGACTGGAAAAAGGTTGCTGAGAAGACAGCTCTTTTACGGCCTATAGAATTAAAAATTGTTCCAATGGCTTTAGAAGGAAGTGCCTTCCGGAGCAAAGTTCTTGACACAGATGAATTGATGGGCTACTGTGGTTTTTTTGCAACTTTCAGCTCTATGATTCCCTCATGGTTGCGGAAGACCAAAAGTTTCAATAAGTTTAGCAAAGCAATGGTGAATCATCTTGGACTGACATTGAGAAAAGAAGATCTGCAGAATGTTGTTGATTTGATGGAACCATATAGCCAAATAAGCAATGGGATAGAGCTTTTGAGCCCTCCACTTGACTGGACAAGGGAAACCAAGTTTCCACATGCTGTCTGGGCAGCTGGTCGTGGTCTTACTGCTCTTTTATTACCAAATTTTGATGTTGTTGATAATCTTTGGCTTGAACCTCTATCATGGCAGGGAATTGGATGTACAAAAATCACAAAAGCAAGAAATGAGGGTTCCATCAATGGGAATTCAGAATCCAGATCATATATTGAAAAGAAGCTTGTGTTTTGTTTTGGTTCATATGTTGCATCGCAAATGTTACTTCCCTTTGGGGAAGAAAACTTACTTTCTATTTCTGAAATACAGCAGGCGCAAGAGATAGCTACTCGAATGGTCATTCAGTATGGGTGGGGACCTGATGACAGTCCTGCAATTTACTACCGTAGTAATGCGGTATATAGACCTCATGTGCATTTCAACTACTTATTTTTTTTCTTGATGTTGATTGTGTGA 3603 0.4327 MDSIIASSPLQFPHRPLFTSVRPIPIRTFIANHRRTPRTPLSLAPITLTPPFTSAAKSTTLAPSPSDDVFLKHFVRALFCFAVGFSALGAFRAPPPALAIAVPWSLLGKIGAEKEKEKAKSHQYSDCTDKLLETVSFLLGAVDEARKGNGDASEVEAALKAVKSKKQEMRKEIDGRLYPALKKLRNEKKALWKRSGEILRAILKATAEYDGLKAKAVANEKEKVRMKELEETVGEMENEYNGVWERVGEIEDQISREETLALSYGVREINFIERECEQLVERLKQEIRRKDFESLPTGSVTRLSKSVIQKDLETVHRKYAEQIILPSILDVEDLGPFFHQDSINFAHRLKRVLKDSREKQRNLEAQIRKKMKKFGKEKRSIIYSPDEDVVKGFPEVELKWMFGNKEVVLPKAVGLHLYHGWKKWREEAKANLKQNLIKDAEFCRQYVAERQERILLDRDRVVSRTWYNEGKKRWEMDPVAVPYAVSKKLIEYVRIRHDWGAMYIVLKGEDKEFYVDIKEFEMLFEDLGGFDELYMKMLACGIPTAVHLMWIPFSELNIRQQFLLVLRVSHGICSGLWNSRVVTYAKNWIFTQIKDTTDDIMVVMGFPIVEFLVPYPVRIQLGMAWPEEIYQTVDTTWYLKWQSEAESNFKSRQSADEDEETSWSFWFLVRAAIYGFVLFHVIKFMRRRLPSLLGFGPLRRDPNRQKLRRVKYYISQKLKKIKQRRKDGIDPIKTAFEQMKRVKKPPIPLKNFASVESMKEEINEVVAFLQNPSAFQEMGAQAPRGVLIVGERGTGKTSLALAIAAEAKVPVVEIKAQQLEAGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGTYIHTKNQDHETFINQLLVELDGFEKQDGVVLMATTRNLKQIDEALQRPGRMDRIFHLQRPTQAEREKILYLAAKETMDNQLIDYVDWKKVAEKTALLRPIELKIVPMALEGSAFRSKVLDTDELMGYCGFFATFSSMIPSWLRKTKSFNKFSKAMVNHLGLTLRKEDLQNVVDLMEPYSQISNGIELLSPPLDWTRETKFPHAVWAAGRGLTALLLPNFDVVDNLWLEPLSWQGIGCTKITKARNEGSINGNSESRSYIEKKLVFCFGSYVASQMLLPFGEENLLSISEIQQAQEIATRMVIQYGWGPDDSPAIYYRSNAVYRPHVHFNYLFFFLMLIV* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1192 1200 Coils Coil 346 373 - -
Pvu7g1192 1200 Gene3D - 729 940 IPR027417 -
Pvu7g1192 1200 PANTHER INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 5, CHLOROPLASTIC-RELATED 70 1183 - -
Pvu7g1192 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 743 955 IPR027417 -
Pvu7g1192 1200 PANTHER METALLOPROTEASE M41 FTSH 70 1183 - -
Pvu7g1192 1200 SUPERFAMILY FtsH protease domain-like 1056 1183 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pvu7g1192 1200 CDD AAA 758 919 - -
Pvu7g1192 1200 Gene3D Peptidase M41 1054 1188 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Pvu7g1192 1200 Coils Coil 152 172 - -
Pvu7g1192 1200 SMART AAA_5 782 922 IPR003593 -
Pvu7g1192 1200 Coils Coil 269 289 - -
Pvu7g1192 1200 Pfam ATPase family associated with various cellular activities (AAA) 786 919 IPR003959 GO:0005524|GO:0016887
Pvu7g1192 1200 Coils Coil 212 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1192 Pvu-Chr7 18114008 18138469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1192 747 955 Miscellaneous Gene Families AT3G47060 41.038 1.23e-38 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1192 - - gmx:100794385 2080.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1192 7 18114008 18138469 Pvu7g1192 7 18114008 18138469 ECH