Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1160 ATGTTCTACTTCCTCAAAAGATTGTGCCTTCTATGTTTCCTTTTACTATCCTTGGAAGTTTCACTCTGGTCGTGTGCTTCACACACAGACTTGGCTTCTTGCTTGCTTAATCACAATATCAAAAACTTTACCACTCTCCCTTACAAAGAACATGACCAACCCTCTTCCCATGATTACTTCAAAATTCTTAATTTTTCCATCCAAAATCTTCGGTTCGCAGAACCCGTGATTCCTAAGCCAATAGCCATTGTATTGCCAGGGAGTTTGGAGCAGCTGCAGAAAAGTGTAGCATGCAGTAGAGAAAGTTCCATGGAGATCAGAGTAAGATGTGGCGGACACAGCTATGAAGGGACTTCGTATGTGGCTGATGATGGCACTCCTTTTGTGATCATTGACATGATGAATTTGAACCATGTTTGGGTGGACATGGAGACAGAAACAGCCTGGGTTGAAGGTGGTGCAACATTGGGAGAGACTTACTATGCAATCTCTCAAGCAAGCAATGAATATGGATTCTCAGCTGGGTCATGTCCAACTGTTGGCGTCGGAGGACACATTGGTGGTGGTGGTTTTGGGTTGTTGTCTAGAAAATATGGTCTTGCAGCGGACAACGTAGTGGATGCCCTTCTCGTTGATGCTGATCAAAATTTGTTGGACCGTGAAACCATGGGAGAAGATGTGTTTTGGGCTATTAGAGGAGGAGGAGGTGGTCTTTGGGGGATCATTTATGCCTGGAAAATCCAGTTGTTGAAAGTGCCACAGGTTGTAACCAGTTTCACTGTATCAAGAACAGGCACAAAAAGTCATGTTGCCAATCTGGTGCACAAATGGCAATATGTGGCACCCAACTTGGAAGATGACTTCTATTTGTCATGCTTTGTTGGTGCTGGTTTGCCCCAAGCTAAAACCAAAGGGTTATCACTAACACTTAATGGTTTCTATCTTGGTCCTAAAACCGATGCCATATCCATTCTACACCATGCTTTTCCAGAGTTGGGTGTTACAGAAGAAGAATGCATAGAAATGAGTTGGATTCAGTCAATTGTTTTCTTCTCTGGCCTAAGTGATGGAGCGTCGGTCTCTGACTTGAAAAACAGGTATGTGCAAGAAAAAGAATATTTCAAGGCCAAATCAGATTATGTAAAAAACCATATTCCTCTTGTGGGCATAGAAACTGCACTGGACATCCTCGAAAAGGAGCCAAAGGGGTATGTTATTCTGGATGCTTATGGTGGAAAGATGCATAATATAAGCAATGATGCAATTGCTTTTCCCCACAGAAGAGGAAACCTGTTTACAATACAGTACCTGATCTATTGGAAAGAAGCTGACAAAGAGAAAAGCAGTGATTATGTAGATTGGATAAGAGGGTTCTATGATGCTATGAGTCCCTTTGTTTCATCTGCTCCAAGGGCTGCATATATTAATTACATGGACTTTGACCTTGGAGTGAGGAAGAGGATAAGAAGTTATGGTGATGTGGAAGATGGTGTTGAAAATGCAAGGGATTGGGGTGAAAAGTACTTCCTCAGTAACTACGACAGACTGGTAAGGGTGAAGACTATGGTTGATCCTAACAACGTTTTCACCAATGAACAAGGCATTCCTCCTTTATCTTTAGCCTCTCCCAGTTTCAAAGCGCAGAACAAATAA 1653 0.4241 MFYFLKRLCLLCFLLLSLEVSLWSCASHTDLASCLLNHNIKNFTTLPYKEHDQPSSHDYFKILNFSIQNLRFAEPVIPKPIAIVLPGSLEQLQKSVACSRESSMEIRVRCGGHSYEGTSYVADDGTPFVIIDMMNLNHVWVDMETETAWVEGGATLGETYYAISQASNEYGFSAGSCPTVGVGGHIGGGGFGLLSRKYGLAADNVVDALLVDADQNLLDRETMGEDVFWAIRGGGGGLWGIIYAWKIQLLKVPQVVTSFTVSRTGTKSHVANLVHKWQYVAPNLEDDFYLSCFVGAGLPQAKTKGLSLTLNGFYLGPKTDAISILHHAFPELGVTEEECIEMSWIQSIVFFSGLSDGASVSDLKNRYVQEKEYFKAKSDYVKNHIPLVGIETALDILEKEPKGYVILDAYGGKMHNISNDAIAFPHRRGNLFTIQYLIYWKEADKEKSSDYVDWIRGFYDAMSPFVSSAPRAAYINYMDFDLGVRKRIRSYGDVEDGVENARDWGEKYFLSNYDRLVRVKTMVDPNNVFTNEQGIPPLSLASPSFKAQNK* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1160 550 PANTHER OS08G0158400 PROTEIN 23 540 - -
Pvu7g1160 550 Gene3D - 141 537 IPR016169 -
Pvu7g1160 550 Gene3D - 255 469 - -
Pvu7g1160 550 Pfam Berberine and berberine like 473 536 IPR012951 GO:0016491|GO:0050660
Pvu7g1160 550 SUPERFAMILY FAD-binding/transporter-associated domain-like 57 253 IPR036318 GO:0050660
Pvu7g1160 550 ProSiteProfiles PCMH-type FAD-binding domain profile. 76 252 IPR016166 GO:0071949
Pvu7g1160 550 PANTHER FAD-BINDING BERBERINE FAMILY PROTEIN 23 540 - -
Pvu7g1160 550 Pfam FAD binding domain 80 217 IPR006094 GO:0050660
Pvu7g1160 550 Gene3D - 30 136 IPR016167 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1160 Pvu-Chr7 14963499 14965839 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1160 28 536 Miscellaneous Gene Families AT1G30760 41.586 5.31e-130 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1160 - - vun:114190730 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1160 7 14963499 14965839 Pvu7g1160 7 14963499 14965839 ECH