Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0797 ATGGAGAAGATGCGTCACGCCGAGGAGCTGGTGAGGGAGTTTCTGGTGTTCCGCGGCTTCACCAACACTCTCGAATCATACGAGACTGAATTGCGCACCGACATCGGCAAGGGCTTCGAGGTCAACAAGATCCTCGACCTAATCTTCTCCGTCTATGTTCCTAAGTTCCACGCCGATAAGCTTGTCGCGCTTCTCGGGTTCTTCAAACACTACCTCTCTTCCCCCTCCGACACGCTACTCGTCTCCACGCTCTCGAAGTTGGAGGCTTCTATTCTACGCTTCTACGTCGTCCACGCCGTGCAGTGCAATCGTAACGACAAGGTGGTTGAGTTCTTCGCGCTCTACGGTTCCGAATTGTTGCAGAGGTCGCAAGATTGGACTCTCTGGTTCGCAATTCCTTATAAGAAGAACCCGCACTTGGATCCCGAGTTTCGGGCTTTTTTCTCTAAGGAGTGGTATCAGGCTTTGCATCTTTCTTCTAGGAACTTCTTCAGCGAGGTTTTCAGTGCTACTCGTCTACCTGCACTACTGAAGGTTAGTTCGGAGATGAATGCTACTAATATACTCAAAAGAGATATCGTACATTTAAATCTGAAGTTGTCCCAACTTCAGGCTTTGCTTGATGAGAAAGAGGCACAGTTACGTCAATTTAGAAGTATGGAAGGGAGTATTGGTTCATCAAGCAATTTGCGTGAAGAAAGTACCCGTACGGTGAAAAATTCTCTGGATGTTTTTCCAACTAGCATTTCACAAGTTGGTCAAATCGAGGTTAGCCAAGATTTAGCTGTGGGTGAACTCGGAAATGTTCATTCCGAGTTGATTGGCTCCACATCTGGTGATGATGATTCAGCTTCTCTATCGAATTACTGTTTGAGGAATGGCGGAGCTGACAATGCCAGCCTAAAAGAAAACGATGGGGATGAAGATTTCGCTGAGGTCAAAGTAGAGCACCAGGAGACATTTCTGGGGCACACCAGTCCAATCAGTCGATGTCGCTTCTCTGCATCTGGAAACAATATTGCCAGTGCTTCTCTTGATGGAACTGTCAGGATATGGACATATGATACATCAACTCCAGTGTCTAGAAACGCAACCATATATTGTGGCACTGAAATTTTGTCACTTGACTGGGAATGTAAATCAGACCGCTTGCTTCTTATAGGTACATCCGATGGGTGCATTAAAGCATGGAATGTGGATGCAAAGAGAGTTGTCTGTGATCTCAGCACAACTGAATCATTTCCAAGTGTATTGGACATAAAGTGCAGTCCTGTGGAACCTATTTTTGTGTCTGCAGCAGCATCTGGAGGGGCTGGTTCCAAATATGTTGGCAACCTGGGTTTTGCTTCCCTGACTGTGTGGAACATGAAGACTTGGAAAGCCATGACAGTCCTTCCTCTTGGAGAAGATCCCCCAGCTATTACTTCTCTATGCTTTAATCACAATGGAAAGATTTTGGCAGCTTCTGCAGTTGATGGAATGATTCACATGTTTGACATGTCTGCTGGTCTACAAATCACTGGCTGGCCAGCACATGATTCTTCCATCACTTCTATTCTGTTTGGACCAGACGAGACTAGCATTTTTAGCCTTGGCTCTGATGGGAAGATTTTTGAGTGGAGTTTGCAAAATCAAGGCCAAATCTTGTGGTCGAGAGACTGTAGTAGGTTCTGTGACCCCCTCATCGGTTCAAAATATTGCAGACATGAAATGGCATTAGATGCAAATGGGAGGAGACTCTTGGTAACATCCAGTTCAGTCAGAGCACCCATATATCAGGTTCATGGTCATATAAATGGTTGGAGAACACTTCCGCACGGTGCTCCTATTACTGCTGTGGATTGGCATCCGACCCTGCCCATTTTCTTGACTGGATCAGCTGATAACTCCGTCCGAGTAACATCTTTGTCATAG 1914 0.4598 MEKMRHAEELVREFLVFRGFTNTLESYETELRTDIGKGFEVNKILDLIFSVYVPKFHADKLVALLGFFKHYLSSPSDTLLVSTLSKLEASILRFYVVHAVQCNRNDKVVEFFALYGSELLQRSQDWTLWFAIPYKKNPHLDPEFRAFFSKEWYQALHLSSRNFFSEVFSATRLPALLKVSSEMNATNILKRDIVHLNLKLSQLQALLDEKEAQLRQFRSMEGSIGSSSNLREESTRTVKNSLDVFPTSISQVGQIEVSQDLAVGELGNVHSELIGSTSGDDDSASLSNYCLRNGGADNASLKENDGDEDFAEVKVEHQETFLGHTSPISRCRFSASGNNIASASLDGTVRIWTYDTSTPVSRNATIYCGTEILSLDWECKSDRLLLIGTSDGCIKAWNVDAKRVVCDLSTTESFPSVLDIKCSPVEPIFVSAAASGGAGSKYVGNLGFASLTVWNMKTWKAMTVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHMFDMSAGLQITGWPAHDSSITSILFGPDETSIFSLGSDGKIFEWSLQNQGQILWSRDCSRFCDPLIGSKYCRHEMALDANGRRLLVTSSSVRAPIYQVHGHINGWRTLPHGAPITAVDWHPTLPIFLTGSADNSVRVTSLS* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0797 637 Coils Coil 193 220 - -
Pvu7g0797 637 ProSiteProfiles Trp-Asp (WD) repeats profile. 321 362 IPR001680 GO:0005515
Pvu7g0797 637 ProSiteProfiles Trp-Asp (WD) repeats profile. 603 637 IPR001680 GO:0005515
Pvu7g0797 637 Gene3D - 440 637 IPR015943 GO:0005515
Pvu7g0797 637 Pfam WD domain, G-beta repeat 318 352 IPR001680 GO:0005515
Pvu7g0797 637 Pfam WD domain, G-beta repeat 596 633 IPR001680 GO:0005515
Pvu7g0797 637 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 321 356 - -
Pvu7g0797 637 ProSiteProfiles Trp-Asp (WD) repeats profile. 509 544 IPR001680 GO:0005515
Pvu7g0797 637 SUPERFAMILY WD40 repeat-like 309 633 IPR036322 GO:0005515
Pvu7g0797 637 PANTHER OS05G0299300 PROTEIN 1 636 - -
Pvu7g0797 637 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 603 637 - -
Pvu7g0797 637 SMART WD40_4 502 541 IPR001680 GO:0005515
Pvu7g0797 637 SMART WD40_4 597 635 IPR001680 GO:0005515
Pvu7g0797 637 SMART WD40_4 458 499 IPR001680 GO:0005515
Pvu7g0797 637 SMART WD40_4 314 353 IPR001680 GO:0005515
Pvu7g0797 637 SMART WD40_4 359 398 IPR001680 GO:0005515
Pvu7g0797 637 Gene3D - 270 438 IPR015943 GO:0005515
Pvu7g0797 637 Pfam Anaphase-promoting complex subunit 4 WD40 domain 468 521 IPR024977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0797 Pvu-Chr7 7235893 7243008 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0797 K24760 - gmx:100788591 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0797 7 7235893 7243008 Pvu7g0797 7 7235893 7243008 ECH