LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g0749	ATGGATTCGAGCGACAGTGGTCGCGGTTACTCCAAGCGCGAGAGGGACGATGAGGATTGGGAGTTCAGCGACAAGAGGAAGGATAGGTCTAGAAAGTTTGGTAGCAACGGGGACGAGGGTGAGGGTTCCGACGGAGGCGCCAGGAGGAAGCGCTCTAGCAGGACTGATAGCGACGATTACGATTCGCGCTCCAAGGGGGCCAAGAAGAGGCAGGAGGAGAGCACGTTGGAGAAGTTGAGCAGTTGGTATGAGGATGGGGAATTGGACGATAAGTCCGCGAGGAAGCGCGCCATGGACGGCGATTTTCACGAGAGTGTGGTGAGTAAGGAGGATGGGAAGGGTGATGGTGGCGGTGGAGGCCGGGAAAAGGTTGGTCATGAGTCTCGGAGTTCGAGGAGGAAATGGGACGAGGTTGATGCTAGCAGTGTAAGGAGGTCGCAGGATGAGAAGGGGGAATTCAGGAGTGGGAAGCGCGATAGTTCTAGGGATAGGGAGAGGAGTGGATCTGCTAGGAGTGAGCATGGGGAGGGCAAAGCCTCTGGTGCTGATAGGGTTGTGAAGTCTAGTAGTAAGGAGGATAGAAGGGGTGATTCCGAGAGAGGGAAGAGTAAGGGGAAGTCGGATTCGGTGGATGCTGGGCGCGAGGAGAGGGTTGAGAAGCCCAGGCATCATAGGGCCCTTGGTTCTGATGGGGCTGAAACCTGGGATAGGTCGTTGAATGCAGAGGAGGATGGGCATGTGCGGGTTAGGGATAAGAGTGCTAGGGAAAGTGGGAACTCAAACAGGTCGAGGACACCTGAAAGGAGTGGAAAACGCCATCAAGATTTGGAAAACTCTGAGGTTGATTATGAAAGAAGTGGTAGCTTTAAAAGGAAGGAGCATGAGGGCGATGGGTTTAAGGATGATAGATCCAAGGGGAAAGATGATGCATGGAATGACAGGAGGAAGGATCGGGAAAGTTCCAAAGAAAGTTGGAAAAGGAGGCAACCGAGTAATGCCGACAAAGAGAAAAACGAGGAGGGTGCTTTTGATGACAACAGAGATTGGGAGTTACCTAGACATGGTTATGAGAGGATGGACAATGAAAGGCCTCATGGACGGTTTGGTGGTAGAAAAGATGTGAGTAGGGGGGAAGCTGTTAAAACATCCACAAAGTTTGGGATTTCGAATGACAATTATGATGTGATAGAGATCCAGACCAAGTTTTATGACTATGGGAAATCAGAATCTATGTCCAACCATACTAAGAGAAACGAAGCTCATCAGCAGTACAATGCGAAATCTGGTGTTAATGATGAAGAATGGCCATATCATCAAGAAGAAAGAGGAAGGAAGAACGATGTATCTGGTGATGATCTGAAGGAGAGATATACAGATGATGACTATGATTTTTATGGGGGAAGGGGAAGAGGTCAGAAAGGTGGTGTATCTGCCCGCAGTACTGGTGGCCAAAGTTCTGGCAGTGGTGGCTCACAGCCTCAATATGGAAATCCGGAGTCTGGTTCCTTTAACAGAGCTGGTCCACAAGGAATGAAAGGTAACAGGGTTGGTAGAGGAGGAAGGATTAGGCCTACTGGGAGAGACAATCAGCAGGTTGGAATGCCATTGCCAATGATGGGATCACCATATGGACCTCTTGCAATGCCTCCACCTGGACCTATGCAGCCTCTTTCACATGGTATGTCACCTGCTCCCGGTCCACCAATGTCCCCTGGAGTCTTCCTTTCACCATTTACTCCTGCTGTTTGGCCTGGAGCCCGAGGTGTCGATATGAATATTATAGGTGTACCACCTGTGTCTCCTGTTCCCCCAGGTCCTTCAGGTCCAAGATTTAATGCTAGTAATTTAGGGAACCCACCAAATCCGGCAATGTATTATAACCAATCAGGTCCTGGAAGGGGAATGCCCCCAAACATCTCTACTTCTGGTTTTAATCCTCCAGGATCAATGGGTCGAGGAGCTCCACCTGATAAATCTCCAGGGGGATGGGCTCCTCCTAAAAGTAGTGGAGCTCTTGGTAAAGCTCCTTCCAGAGGTGAACAGAATGATTATTCTCAAAACTTTGTTGACACTGGTATGCGGCCACAAAATTTCATTAGGGAGCTTGAGCTCACAAATGTTGTGGAGGACTACCCTAAGCTTAGAGAGCTTATACAGAAAAAGGATGAGATTGTGGAAAAATCTGCATCTGCTCCTTTGTATTATAAGTGTGATTTGAAGGAGTTTGAACTTTCTCCTGAGTTCTTTGGTACAAAGTTTGATGTCATTCTTGTAGATCCCCCATGGGAGGAGTATGTGCACCGTGCCCCTGGTGTGGCTGATCACATGGAGTATTGGACATTTGAAGAAATAATGAATCTCAAGATCGAGGCTATAGCAGATACGCCTTCTTTCATTTTCCTTTGGGTGGGTGACGGTGTAGGCCTTGAACAAGGTCGTCAATGTCTAAAGAAGTGGGGATTTCGTAGGTGTGAAGATATATGTTGGGTAAAGACAAACAAAAGTAATGCAACTCCAGGATTGCGGCATGATTCACATACTTTATTTCAACATTCAAAGGAACACTGCTTGATGGGCATAAAAGGAACTGTTCGTAGAAGTACTGATGGCCATATAATTCATGCCAATATTGACACAGATGTCATTATAGCTGAAGAACCTCCGTATGGTTCAACACAAAAGCCTGAAGATATGTACAGGATTATTGAGCACTTTGCCCTTGGAAGGAGGAGACTAGAACTATTTGGTGAAGACCACAATATCCGAGCTGGCTGGCTGACTGCTGGTAAAGAATTGTCGTCTTCAAATTTTAATAAAGAGGCATATGTGAAAAACTTTTCTGACAAAGATGGGAAAGTCTGGCAAGGAGGTGGGGGAAGAAATCCACCTCCGGAGGCACCTCATCTGGTGGTGACTACTTCTGATATAGAGGCTCTTAGGCCCAAGTCACCAATGAAGAACCAACAACAAATGCAGCAGCAGAATTCAGTATCCATTTCTTTGACGACAGGTAGCGGGTCAAACAGAAGGCCTGCTGGAAATTCACCGCAGAACCCACCTGCACTCAGTGTCAACCAAGATGCATCAAGCTCAAACCCTTCTACTCCAGCTCCTTGGGGTTCACCTTTGGAGGGCTTCAAGGGACGTGAAGGCTCTGTATTGCCCTCAGATGATAAAGTAATGGATATATACGGTTTTCATGGGCCAACACCTGCGGGCTATCTAGATTTTGAATCTTACAGACAAATGAATATGTTGTAG	3261	0.4753	MDSSDSGRGYSKRERDDEDWEFSDKRKDRSRKFGSNGDEGEGSDGGARRKRSSRTDSDDYDSRSKGAKKRQEESTLEKLSSWYEDGELDDKSARKRAMDGDFHESVVSKEDGKGDGGGGGREKVGHESRSSRRKWDEVDASSVRRSQDEKGEFRSGKRDSSRDRERSGSARSEHGEGKASGADRVVKSSSKEDRRGDSERGKSKGKSDSVDAGREERVEKPRHHRALGSDGAETWDRSLNAEEDGHVRVRDKSARESGNSNRSRTPERSGKRHQDLENSEVDYERSGSFKRKEHEGDGFKDDRSKGKDDAWNDRRKDRESSKESWKRRQPSNADKEKNEEGAFDDNRDWELPRHGYERMDNERPHGRFGGRKDVSRGEAVKTSTKFGISNDNYDVIEIQTKFYDYGKSESMSNHTKRNEAHQQYNAKSGVNDEEWPYHQEERGRKNDVSGDDLKERYTDDDYDFYGGRGRGQKGGVSARSTGGQSSGSGGSQPQYGNPESGSFNRAGPQGMKGNRVGRGGRIRPTGRDNQQVGMPLPMMGSPYGPLAMPPPGPMQPLSHGMSPAPGPPMSPGVFLSPFTPAVWPGARGVDMNIIGVPPVSPVPPGPSGPRFNASNLGNPPNPAMYYNQSGPGRGMPPNISTSGFNPPGSMGRGAPPDKSPGGWAPPKSSGALGKAPSRGEQNDYSQNFVDTGMRPQNFIRELELTNVVEDYPKLRELIQKKDEIVEKSASAPLYYKCDLKEFELSPEFFGTKFDVILVDPPWEEYVHRAPGVADHMEYWTFEEIMNLKIEAIADTPSFIFLWVGDGVGLEQGRQCLKKWGFRRCEDICWVKTNKSNATPGLRHDSHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDTDVIIAEEPPYGSTQKPEDMYRIIEHFALGRRRLELFGEDHNIRAGWLTAGKELSSSNFNKEAYVKNFSDKDGKVWQGGGGRNPPPEAPHLVVTTSDIEALRPKSPMKNQQQMQQQNSVSISLTTGSGSNRRPAGNSPQNPPALSVNQDASSSNPSTPAPWGSPLEGFKGREGSVLPSDDKVMDIYGFHGPTPAGYLDFESYRQMNML*	1087

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g0749	1086	MobiDBLite	consensus disorder prediction	1	387	-	-
	Pvu7g0749	1086	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	747	901	IPR029063	-
	Pvu7g0749	1086	PANTHER	N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT	1	1086	IPR045123	-
	Pvu7g0749	1086	ProSiteProfiles	mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase-like (MT-A70-like) family profile.	527	1069	-	-
	Pvu7g0749	1086	ProSitePatterns	N-6 Adenine-specific DNA methylases signature.	756	762	IPR002052	GO:0003676\|GO:0008168\|GO:0032259
	Pvu7g0749	1086	MobiDBLite	consensus disorder prediction	633	647	-	-
	Pvu7g0749	1086	PANTHER	N6-ADENOSINE-METHYLTRANSFERASE SUBUNIT METTL14	1	1086	-	-
	Pvu7g0749	1086	ProSiteProfiles	MT-A70-like family profile.	712	951	IPR007757	-
	Pvu7g0749	1086	MobiDBLite	consensus disorder prediction	982	1054	-	-
	Pvu7g0749	1086	MobiDBLite	consensus disorder prediction	433	467	-	-
	Pvu7g0749	1086	MobiDBLite	consensus disorder prediction	408	537	-	-
	Pvu7g0749	1086	Pfam	MT-A70	753	931	IPR007757	-
	Pvu7g0749	1086	MobiDBLite	consensus disorder prediction	477	504	-	-
	Pvu7g0749	1086	MobiDBLite	consensus disorder prediction	1	379	-	-
	Pvu7g0749	1086	MobiDBLite	consensus disorder prediction	983	1038	-	-
	Pvu7g0749	1086	MobiDBLite	consensus disorder prediction	601	690	-	-
	Pvu7g0749	1086	MobiDBLite	consensus disorder prediction	611	625	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu7g0749	Pvu-Chr7	6679783	6688172	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g0749	K23960		-	gmx:100798100	1913.66

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu7g0749	7	6679783	6688172	Pvu7g0749	7	6679783	6688172	ECH