Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0728 ATGGTTACACAGTTCGGCATCAAATTCGCCGTCCACCTCATCACCAACCACTTCGGCAATCTCGTCGCTAAGGTATGTGAAAATCTATTTAGTCATGGATCACTCACTTTGGATCAATTGGTTCGATACTCGGAGCTTACTAAGGACCAAGTCAAGAACTCCCTACTTGTCTTAGTTCAACACAATTGTTGCCAAGCATTTATTTCTGCACCTGAAGATGACGATGATGATGCAGACAGATTGAGAGTTAGAACTCAGTACTTGGTATTGTTTGATAACATAATCCACCGATTGAGATTTCCCAAATTCTTGGAGACTGTGTCGCGGAAGCTTGATGAAGAATGTGTGGAGCTTCTTGATGGTTTGCTTCGAGATGGTAGGCTTACCCTGAAACAAATGGTTGACAGAGCAAGTCAAGGGAAAGAAAATGCCGTGGATACAAAAGTTGTACGAGAGATACTGAGTAAACTTTTAACAGCTCGACTTGTTGAACGCTGCCCTGCCCCTGAGCCAGTTGTTTCTACCTCATTTAAAGAAACTACTACTAGGAAGCGGGGTGCTAAGTCTGCCAAGATATTTGAAGCACCTGAGACATTAGAACAACGCGTTCTAGAAGCAGCAGTGCCTGGGAATGCAATCAGATTTTCATTCACTGCTGATATGAGATCTAATGTTGACGGAGAAACAAATTCAGATGATGATCAAATTACTAGTGTTGAACAGAATGATGCAAAAGAGGAGGAAATTCTTTGGCGTGCAAATTTTGAGGAGTTCATTCGTCATATTAGGCATAAGGCATTGATTGAGAATATAAGAACTCAGCATGATGATGGAACTGCTACTGTCTTAAGTGCAGTATTGGAGGCAACAAAAACTGTAGAGAAAAAAGTGAAAATGGAGAATTCAGTTCCTTTGTCACTCGATACAATTACCGCAGAGGTGATGAAGACCGATACAGGACGAACGATGACCATAGATCGTATCAGAGCTTCCCTTAGCCAGTTGGGCTGTTCACAGAGGATGATTGTAGATGATGCATATAGTATTGATTTGAAGAAAATTATTGAACGAGCTCAAAATGAAGAGGTTGAGTCAATTGTGTTGAAAAGGTATGGAAGGGATGCGTACAGAATGTTCAGGCTACTGTCAAAGGATTGCTGTTTTCATGACACAGATCAGATAGCAGCATCTACTCTGGTTGAGAAAAAGGAGGCTCCAAAGTTGCTATATAGGTTATGGAAGGACAATTACTTGTATATGGAGAAAGTAATTGCGACGGGAGTCAAGCAAACGACTATTTTGATGTGGAAAGTCAATAAACCTCTGGTTTGGGAACATGTACTGGACGAGATGTACCACGCTGCCTTAAATTTGAGCCTAAGAATGGCTTTTGAGCAGGAAAAGGATGAAGAGCTTTTGAATGTTCCCAAAGACAAGCTTAAGGAGCCAGGGCCACTGCAGAAGAAATACAAACGGCTACTAAATGTCTGGTTACTCCTGGGGTCATCATTGATGAAGCTCGATGAAGCTCTCATGCTCTTCCATGACTTCTGA 1554 0.4176 MVTQFGIKFAVHLITNHFGNLVAKVCENLFSHGSLTLDQLVRYSELTKDQVKNSLLVLVQHNCCQAFISAPEDDDDDADRLRVRTQYLVLFDNIIHRLRFPKFLETVSRKLDEECVELLDGLLRDGRLTLKQMVDRASQGKENAVDTKVVREILSKLLTARLVERCPAPEPVVSTSFKETTTRKRGAKSAKIFEAPETLEQRVLEAAVPGNAIRFSFTADMRSNVDGETNSDDDQITSVEQNDAKEEEILWRANFEEFIRHIRHKALIENIRTQHDDGTATVLSAVLEATKTVEKKVKMENSVPLSLDTITAEVMKTDTGRTMTIDRIRASLSQLGCSQRMIVDDAYSIDLKKIIERAQNEEVESIVLKRYGRDAYRMFRLLSKDCCFHDTDQIAASTLVEKKEAPKLLYRLWKDNYLYMEKVIATGVKQTTILMWKVNKPLVWEHVLDEMYHAALNLSLRMAFEQEKDEELLNVPKDKLKEPGPLQKKYKRLLNVWLLLGSSLMKLDEALMLFHDF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0728 517 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 3 517 IPR039748 GO:0003697|GO:0005666
Pvu7g0728 517 Pfam RNA polymerase III subunit RPC82 153 329 IPR008806 GO:0003677|GO:0006351
Pvu7g0728 517 Gene3D - 351 439 IPR036388 -
Pvu7g0728 517 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 10 67 IPR013197 -
Pvu7g0728 517 Gene3D - 2 73 IPR036388 -
Pvu7g0728 517 Gene3D - 91 175 IPR036388 -
Pvu7g0728 517 Gene3D - 254 348 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0728 K03023 - gmx:100784750 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0728 7 6443304 6454806 Pvu7g0728 7 6443304 6454806 ECH