Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0714 ATGAATTCAATAACCCATTTCCTTTTAGGTCCAAAGATGGTCCACAAATTTTCCCATTCTTTGATTATTTTGCGGAGATTATGTAGCCATCCGTTTGATGGTGATGGATTTGAATGCATTGATGAGCCTTTGAAAAAACTAGGATTAAATTGTGATTCTACTGTGGATGTAACGCTCCGTTTAAACGAGGACTGGGGTTATAACCAAAAGCAGTTTTCACTTAGAAAAGGGTTCTTAGAAAATGTGAAGTTAGATGCTAAGAGGGTCCTTGAGGTTCTCCGGCAAGACGGTCCCGGTCTTGATGCGAGGTTGGTTTTGGGTGAGTTGCATGTAAAGCCATCAGGGCTTCTTGTGAGGGAGGTTCTCTTTGGAATTTTGAAGATCATAAATTCTGAGAATAAAACTAGGTGTGCAAAGCTGGCATACAAGTTTTTTGTGTGGTGTAGTCAGCAAGAGGGTTACCGGCACACTGTGAATGCATATCACTTAATTATGAATATATATGCGGAGTGTGAGGAATTTAAGGCATTGTGGAGATTGGTTGATGAAATGATTGAGAAAGGGCTTCCTGCTACGGCTCGAACTTTCAATATCTTGATTCGTACTTGTGGTGAGGCAGGATTGGCTAAGAAATTGGTGGAGAGGTTCATAAAATCGAAGACGTTTAACTTTAGGCCTTTTAAGCACTCCTACAATGCTATCCTACATGGTCTTCTTGTTTTAAAGCAGTACAAGTTGATTGAGTGGGTTTATCAGCAGTTGTTGCTTGATGGATTTTCTTCAGATATTTTAACTTACAATATTGTCATGTATGCCAAGTACAGACTTGGAAAGTTGGATCAATTCCAAAGACTGTTTGATGAGATGGGTAGAAATGGATTTTCTCCAGATTTTCATACCTTCAATATTCTTCTTCATGTTCTTGGCAAAGGGGACAAACCGCTTGCAGCTCTCAATCTCTTAAATCACATGAGAGAAATGGGTATAGATCCAACTGTGCTTCATTTCACTACATTGATAGATGGACTCAGCAGAGCTGGAAATCTGGATGCTTGCAAGTATTTTTTTGATGAAATGATAAAGAATGGATGCATCCCAGATGTGGTGGCTTACACTGTAATGATAACAGGATATGTAGTGGCTGGTGAGCTTGAGAAAGCCCTCGAAATGTATCAAGATATGATTTCTAGAGAACAAGTTCCAAATGTTTTTACATACAATTCCATAATTCGGGGATTATGCGTGGCAGGAAAATTTGATGAAGCATGTTCAATGCTCAAGGAAATGGAAACCAAAGGTTGTAGTCCAAACTCGGTTGTCTATGATTCTTTAGTGAGTAGTTTACGGAATGCTGGAAAGACTGCTGATGCTCATGAAGTGATAAGACAGATGACAGAGAAGAGGAAGTATACCCACATACATTCGAGATACGAAGGGTACAAATGA 1446 0.3942 MNSITHFLLGPKMVHKFSHSLIILRRLCSHPFDGDGFECIDEPLKKLGLNCDSTVDVTLRLNEDWGYNQKQFSLRKGFLENVKLDAKRVLEVLRQDGPGLDARLVLGELHVKPSGLLVREVLFGILKIINSENKTRCAKLAYKFFVWCSQQEGYRHTVNAYHLIMNIYAECEEFKALWRLVDEMIEKGLPATARTFNILIRTCGEAGLAKKLVERFIKSKTFNFRPFKHSYNAILHGLLVLKQYKLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQFQRLFDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIDPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNGCIPDVVAYTVMITGYVVAGELEKALEMYQDMISREQVPNVFTYNSIIRGLCVAGKFDEACSMLKEMETKGCSPNSVVYDSLVSSLRNAGKTADAHEVIRQMTEKRKYTHIHSRYEGYK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0714 481 PANTHER OS10G0506000 PROTEIN 1 481 - -
Pvu7g0714 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 332 366 IPR002885 -
Pvu7g0714 481 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 1 481 - -
Pvu7g0714 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 367 401 IPR002885 -
Pvu7g0714 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 437 467 IPR002885 -
Pvu7g0714 481 Pfam PPR repeat 432 465 IPR002885 -
Pvu7g0714 481 Pfam PPR repeat 327 359 IPR002885 -
Pvu7g0714 481 Gene3D Tetratricopeptide repeat domain 354 479 IPR011990 GO:0005515
Pvu7g0714 481 Gene3D Tetratricopeptide repeat domain 244 353 IPR011990 GO:0005515
Pvu7g0714 481 Gene3D Tetratricopeptide repeat domain 116 243 IPR011990 GO:0005515
Pvu7g0714 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 297 331 IPR002885 -
Pvu7g0714 481 Pfam PPR repeat family 366 414 IPR002885 -
Pvu7g0714 481 Pfam PPR repeat family 262 308 IPR002885 -
Pvu7g0714 481 Pfam PPR repeat family 157 203 IPR002885 -
Pvu7g0714 481 TIGRFAM PPR: pentatricopeptide repeat domain 369 403 IPR002885 -
Pvu7g0714 481 TIGRFAM PPR: pentatricopeptide repeat domain 299 332 IPR002885 -
Pvu7g0714 481 TIGRFAM PPR: pentatricopeptide repeat domain 336 368 IPR002885 -
Pvu7g0714 481 TIGRFAM PPR: pentatricopeptide repeat domain 404 438 IPR002885 -
Pvu7g0714 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 262 296 IPR002885 -
Pvu7g0714 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 157 191 IPR002885 -
Pvu7g0714 481 SUPERFAMILY HCP-like 230 427 - -
Pvu7g0714 481 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 402 436 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0714 183 477 Miscellaneous Gene Families AT4G11690 28.378 1.94e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0714 - - gmx:100792512 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0714 7 6310582 6314976 Pvu7g0714 7 6310582 6314976 ECH