Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0679 ATGGCATCCTCTGCCAGCAACAAAGAGCAAGTGCCACCCACACCCGAGGACCCTGAGAAGAAAAAGAAAAAGGAAGAAAAGGCTAGAGAGAAGCAATTGAAGAAAGAGAAGTTTCTTCTTAAGCAAGCTCAGCAAGCACAACAATCATCCAATGCTTCTAAAAAAAGTGAAAAGAAAGTTGTAAAGCGTGGTGCGGAGGATGAGAATCCTGAAGATTATGTTGATCCTGAGACTCCAATTGGTGAGAAGAAGCAAATGGCTCGGCAAATGGCAAAGCAGTATAGTCCAACTGCCGTGGAGAAATCGTGGTATGAATGGTGGGAGAAATCAAGGTACTTTGTGGCAGATGCTAACAGCTCCAAACCTCCTTTTGTTATTGTTTTGCCCCCTCCGAATGTGACTGGTGCTCTCCATATAGGTCATGCTCTAACAGCCGCAATAGAGGACACAATGATTCGATGGAAGAGGATGTCTGGATACAATGCCTTGTGGGTACCTGGGATGGATCATGCTGGGATTGCTACGCAGGTAGTTGTGGAGAAGAAGATAATGCGGGAAAGAAAACTAACTAGGCATGATCTAGGTCGTGAGAAATTTGTCTCTGAGGTTTGGGATTGGAAACACAAGTATGGGGGCACAATATTACAACAATTGCGCCGATTAGGAGCCTCTTTGGATTGGTCTCGTGAGTGCTTCACAATGGATGAAAGAAGAAGTAAGGCTGTTACAGAGGCTTTTGTAAGGCTTTACAAGCAAGACCTTATCTATAGGGACCTTCGTTTAGTGAATTGGGATTGTGTGTTACGAACTGCAATATCTGATATTGAGGTGGATTATATTGATATAAAAGAAAGGAGTCTACTAAAGGTTCCAGGATATGATAAACCAGTGGAATTTGGAGTTTTAACAAAGTTTGCATACCCTGTGGAAGGGAACCTAGGTGAAATTGTTGTTGCCACAACTAGAATTGAAACAATGCTTGGTGATACTGCTATTGCAGTACATCCTAATGATGACAGATATAGCCATTTTCATGGAAAATATGCTATTCATCCATTTAATGGAAGAAAACTTCCTATAATCTGTGATGATATTCTTGTTGATCCAAAGTTCGGGACTGGTGCTGTTAAGATTACACCTGCCCATGATCCAAATGATTTCGAGGTGGGTAAACGTCACAACCTTGAATTCATTAATGTTTTCACAGATGATGGGAAAATAAATTCCAGTGGTGGCTCTGATTTTGTGGGCATGCCACGGTTTAAAGCTCGAGAGGCAGTAACAGAATTTTTACAGAAGAAGGGTCTTTATAGAGGATCTGAAAACAATGAGATGCGCCTTGGGGTTTGTTCAAGAAGCAATGATGTTGTGGAGCCCATGATAAAGCCCCAGTGGTATGTCAGTTGCAATGATTTGGCAAAGCAATCTCTTAATGCTGCTGTTGACGAGGAAAACAAAAGGCTAGATATTGTTCCAAAACAATATTTGGCTGATTGGAAGAGATGGCTAGAAAACATTCGTGATTGGTGCATTTCACGGCAGCTATGGTGGGGTCACCGAATACCTGCATGGTATGTCACTTTGGAGGATGACGTGCTGCAGGAATTTGGTGCTTATAACGATCATTGGGTTGTGGCAAGAAATGAAGAGGAGGCCCAAAAGGTTGCTAGCCAGAAGTATGGTGAAAAGAAGTTTCGTTTAGGCCAGGATCCTGATGTTCTTGATACATGGTTTTCTTCTGGTCTGTTCCCATTATCTGTGCTGGGATGGCCTGATGAGACAGAGGACCTGAAGACATTCTATCCAACTTCTGTTCTGGAAACTGGCCATGATATCATCTTTTTTTGGGTTGCTCGTATGGTGATGTTTGGATTGAAGTTGGGTGGTGATGTGCCTTTCTCAACGATTTATTTGCATCCCATGATTCGTGATGCACATGGGCGGAAGATGTCCAAGTCCCTGGGGAATGTTATTGATCCCATTGAAGTGATAAGTGGGATATCTCTGGAAGGTCTACACAAGAGGTTAGAGGCTGGTAACCTGGATCCCAAAGAACTTGCTACTGCTATAGAGGGTCAGAAGAAGGATTTTCCAAATGGTATTGATGAATGTGGAGCTGATGCTCTCCGTTTTGCACTGGTCTCGTACACAGCTCAGTCTGACAAAATTAACCTAGATATTCAAAGGGTGGTTGGGTATCGCCAATGGTGTAATAAACTGTGGAATGCAGTAAGATTTGCTATGAGCAAGCTTGGGGATGATTATATTCCACCAGCAGAATTGAATCTAGATGTTCTCCCATTTAGCTGCCTGTGGATACTCTCAGTGTTGAATAAAACCATAACGAAAACAGTGAAGTCTCTAGAATCATTTGAATTCTCGCAAGCTACCACTGCTGTATATTCTTGGTGGCAGTATCAATTGTGTGATGTATTTATTGAAGTGATTAAGCCTTACTTTACTGGTAATGATCCTAAGTTTGCCTCTGAAAGACGCTTTGCACAAGATACTTTGTGGTTTTGTCTGGACAATGGCCTTCGATTGCTTCATCCCTTCATGCCTTTTGTCACGGAAGAATTATGGCAACGGCTTCCTTCACCCAGGGAATGTAAGAGAGCAGAATCTATCATGATATGCAATTATCCATCAGCTGTAGAGGGCTGGAATAATGAAACGGTGGAGAATGAAATGGACATTATTGAGTCTACTATTAAGTCTCTGAGGTCACTGGCTAAAGAAAAACGTGACAGGCGACCGGCTTTTGTTCTCTGCCGAACACAGGCGGTTACTGTGATTATTAAGAGCCACCAACTGGAGATTGTAACATTAGCTAATGTATCATCTTTGACAGTAATCTCTGAAACTGATGCTGTTCCATCTGGATATGCTGATGCCGTCGTAAATGAAAGCATTTCTGTTTATCTAGAGTTACAAGGAACTAATTCTGCAGAGGCTGAGCAAGGGAAGATCAAGAAGATAGATGAGCTGAAAAAGCAAATAGAAAGACTAGAGAAGATTATGAATGCTCCAGGTTATGAAGAGAAGGTTTTACCAAATGTTCGAGCAAAGAACCAGGAGAAGCTAGATTCCCTAAAGGAGCGTTTATTGCTTGAGGAAACGGCTGGTCTGACTCTCTAG 3138 0.4229 MASSASNKEQVPPTPEDPEKKKKKEEKAREKQLKKEKFLLKQAQQAQQSSNASKKSEKKVVKRGAEDENPEDYVDPETPIGEKKQMARQMAKQYSPTAVEKSWYEWWEKSRYFVADANSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTMIRWKRMSGYNALWVPGMDHAGIATQVVVEKKIMRERKLTRHDLGREKFVSEVWDWKHKYGGTILQQLRRLGASLDWSRECFTMDERRSKAVTEAFVRLYKQDLIYRDLRLVNWDCVLRTAISDIEVDYIDIKERSLLKVPGYDKPVEFGVLTKFAYPVEGNLGEIVVATTRIETMLGDTAIAVHPNDDRYSHFHGKYAIHPFNGRKLPIICDDILVDPKFGTGAVKITPAHDPNDFEVGKRHNLEFINVFTDDGKINSSGGSDFVGMPRFKAREAVTEFLQKKGLYRGSENNEMRLGVCSRSNDVVEPMIKPQWYVSCNDLAKQSLNAAVDEENKRLDIVPKQYLADWKRWLENIRDWCISRQLWWGHRIPAWYVTLEDDVLQEFGAYNDHWVVARNEEEAQKVASQKYGEKKFRLGQDPDVLDTWFSSGLFPLSVLGWPDETEDLKTFYPTSVLETGHDIIFFWVARMVMFGLKLGGDVPFSTIYLHPMIRDAHGRKMSKSLGNVIDPIEVISGISLEGLHKRLEAGNLDPKELATAIEGQKKDFPNGIDECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFAMSKLGDDYIPPAELNLDVLPFSCLWILSVLNKTITKTVKSLESFEFSQATTAVYSWWQYQLCDVFIEVIKPYFTGNDPKFASERRFAQDTLWFCLDNGLRLLHPFMPFVTEELWQRLPSPRECKRAESIMICNYPSAVEGWNNETVENEMDIIESTIKSLRSLAKEKRDRRPAFVLCRTQAVTVIIKSHQLEIVTLANVSSLTVISETDAVPSGYADAVVNESISVYLELQGTNSAEAEQGKIKKIDELKKQIERLEKIMNAPGYEEKVLPNVRAKNQEKLDSLKERLLLEETAGLTL* 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0679 1045 Coils Coil 986 1006 - -
Pvu7g0679 1045 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 297 447 IPR009008 GO:0002161|GO:0006418
Pvu7g0679 1045 TIGRFAM valS: valine--tRNA ligase 90 1028 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pvu7g0679 1045 Coils Coil 890 910 - -
Pvu7g0679 1045 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 131 142 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu7g0679 1045 CDD Anticodon_Ia_Val 725 864 IPR033705 -
Pvu7g0679 1045 MobiDBLite consensus disorder prediction 1 80 - -
Pvu7g0679 1045 PANTHER BNAA08G31530D PROTEIN 14 1032 - -
Pvu7g0679 1045 Hamap Valine--tRNA ligase [valS]. 90 1044 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pvu7g0679 1045 PANTHER VALYL-TRNA SYNTHETASES 14 1032 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pvu7g0679 1045 CDD ValRS_core 122 725 - -
Pvu7g0679 1045 SUPERFAMILY Nucleotidylyl transferase 89 735 - -
Pvu7g0679 1045 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 737 992 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu7g0679 1045 PRINTS Valyl-tRNA synthetase signature 124 135 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pvu7g0679 1045 PRINTS Valyl-tRNA synthetase signature 335 352 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pvu7g0679 1045 PRINTS Valyl-tRNA synthetase signature 452 465 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pvu7g0679 1045 PRINTS Valyl-tRNA synthetase signature 570 591 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pvu7g0679 1045 PRINTS Valyl-tRNA synthetase signature 601 619 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Pvu7g0679 1045 Gene3D HUPs 91 289 IPR014729 -
Pvu7g0679 1045 Gene3D HUPs 475 724 IPR014729 -
Pvu7g0679 1045 MobiDBLite consensus disorder prediction 13 38 - -
Pvu7g0679 1045 MobiDBLite consensus disorder prediction 55 69 - -
Pvu7g0679 1045 Pfam Anticodon-binding domain of tRNA ligase 772 914 IPR013155 GO:0004812|GO:0006418
Pvu7g0679 1045 Pfam tRNA synthetases class I (I, L, M and V) 103 726 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu7g0679 1045 Gene3D - 731 915 - -
Pvu7g0679 1045 Gene3D - 298 443 IPR009008 GO:0002161|GO:0006418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0679 Pvu-Chr7 5912501 5925223 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0679 K01873 - gmx:100798111 1875.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0679 7 5912501 5925223 Pvu7g0679 7 5912501 5925223 ECH