Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0678 ATGGGTTCCTCTGCTGCCACAAAAAACATTGCGGATTCAGCGTCGTGGTACTGTGGCATGATGCTGTTGGGCATGATACTGTTGGGGTCTGTAAGGGAAAGCGCGGTGGCCGGAGAAGTTGAGGCTATGAAAGGGAGCAACCTCCGTGAACGACCGTGTGATGAAATATACGTTGTCGGAGAAGGAGAGAGCTTGCACACCATCAGCGACAAGTGCAATGACCCGTTTATCGTGGAGCGGAACCCGCATATCCATGACTCCGATGATGTTTACCCTGGCCTTGTCATCAAAATCATCCCCATCCTTCAATACTGA 315 0.5111 MGSSAATKNIADSASWYCGMMLLGMILLGSVRESAVAGEVEAMKGSNLRERPCDEIYVVGEGESLHTISDKCNDPFIVERNPHIHDSDDVYPGLVIKIIPILQY* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0678 104 PANTHER LYSM DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 6 101 - -
Pvu7g0678 104 Gene3D LysM domain 49 103 IPR036779 -
Pvu7g0678 104 CDD LysM 56 98 IPR018392 -
Pvu7g0678 104 PANTHER EMBRYO SAC 1 6 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0678 Pvu-Chr7 5898851 5899392 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0678 - - gmx:100500035 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0678 7 5898851 5899392 Pvu7g0678 7 5898851 5899392 ECH