Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0478 ATGTTGCAAACCCTAGGAGGCGTAACCCCTCGCTTCGTGAATCGGTCATGGCTCCGAAACCCGACGGTGCGTGCAATGACATTCTCTTCCTCCTCCGATTATGGAGACCAGTCACGAGGTGGCCTTCCCCGCTTCTACTCCGAAATTCTTCCTCCTTCCAAGGGTAGTGTTATACGCGTGCAAGGTGATGAATTCTGGCATATGACAAAAGTATTGAGGTTGAGCACCAACGATAGGGTACAGCTCTTCAATGGGAAAGGAGGTCTTGTAGAAGGATGCATACAGGACATTGATCGCAGTGGACTTGATTTTGTTGCATCGAGTGATTTGATATCAATACCTCCACAAAATACACAATTGCACGTATTTGCTGGTTTTGGTACTCTAAAGGGTGGCCGTGCTGATTGGCTTGTAGAGAAGTGCACAGAACTTGGAGCCGATAGTGTAACTCCTCTGTTGACTGAACGTTCTCCATCGATCTCAGAAAATCGGGTGGACAGATTGAAACGTGTCATTTTAGCAGCATCGAAACAATGTCAACGACTGCATGAAATGGTTCTGAAAGATCCTTTAGAGATTGATGACCTTTTGAACCTTATAGCACAATCAAAACTAGCTCTTGTTGCGACAGCGAAGGCAACTCCTGTTCTTAGTGCATTGACATCATTGGAAAAGGAAACCAGTGGCTTAATAATTATTGGACCAGAAGGCGATTTCACCGAGAATGAAGCGAGTTTGATGATGGAAGCAGGTGCTACAGCTGTTAGTCTTGGACCTCATCGTCTTCGGGTTGAAACTGCCACGATATCACTTTTGGCAACTGTCATGTTATGGTCTGACTCGCTGGAAACTTCGGTCAGTTGA 864 0.4583 MLQTLGGVTPRFVNRSWLRNPTVRAMTFSSSSDYGDQSRGGLPRFYSEILPPSKGSVIRVQGDEFWHMTKVLRLSTNDRVQLFNGKGGLVEGCIQDIDRSGLDFVASSDLISIPPQNTQLHVFAGFGTLKGGRADWLVEKCTELGADSVTPLLTERSPSISENRVDRLKRVILAASKQCQRLHEMVLKDPLEIDDLLNLIAQSKLALVATAKATPVLSALTSLEKETSGLIIIGPEGDFTENEASLMMEAGATAVSLGPHRLRVETATISLLATVMLWSDSLETSVS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0478 287 SUPERFAMILY alpha/beta knot 118 279 IPR029028 -
Pvu7g0478 287 TIGRFAM TIGR00046: RNA methyltransferase, RsmE family 57 276 IPR006700 GO:0006364|GO:0008168
Pvu7g0478 287 Gene3D - 41 285 IPR029026 -
Pvu7g0478 287 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E 42 282 IPR006700 GO:0006364|GO:0008168
Pvu7g0478 287 SUPERFAMILY PUA domain-like 43 102 IPR015947 -
Pvu7g0478 287 CDD RsmE-like 120 273 IPR046886 -
Pvu7g0478 287 Pfam RNA methyltransferase PUA domain 61 104 IPR046887 -
Pvu7g0478 287 Pfam RNA methyltransferase domain 118 275 IPR046886 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0478 K09761 - gmx:100777253 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0478 7 3768996 3772161 Pvu7g0478 7 3768996 3772161 ECH