Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0455 ATGTCCTCTTCTCCCTCCCTATCGCTCTCTGTTTCCTCCATCCATGGTTCTTCCTTCCTCCATGGAACAAAGTTCTTTCCCCTTTCTCGAAGAGTGACACCACGCGCCTTCAATTCTTCCTCTGCCAAGTGCTCCCTCGACCACATCCCCAAACAGTTCAGAAAGGACAATCTCAAAGATGGATTGACGGAAAACTACAAGAACGTACCTCAATATCTATATGGCCTCAGTCCTTCACAAATGGACATGTTCATGACAGAAGATAATCCTGCCCGCCGGCAATCTGAAAAAGTTACAGAGGAAAGCATATCATCTGCCAAGAATTATATAGATAATGGTGGAATGTGGAGTCTATCTGGCATGGCAAAAAATGGTCCTTCAAAATACAGCATGAGTGTTAGTATGTATCAAGGAGGTAGGGGAGGTGACAGGCCAGATACTGCTCCACCAGATCTGCCTTCTTTGCTTTTGGACGCTCGAATATGCTATCTGGGTATGCCGATTGTTCCAGCTGTAACAGAACTTGTCATTGCTCAATTCATGTGGTTGGATTATGATAACCCAACCAAACCTATTTACTTGTATATTAATTCGTCTGGAACTCAGAATGAGAAGAATGAAACCGTGGGATCAGAAACCGATGCATATTCCATAGCTGATATGATGTCTTATGTCAAAGCAGATGTGTATACTGTGAATTGTGGTATGGCATTTGGTCAATCAGCAATGCTTCTGTCGCTTGGAACAAAGGGTTATCGTGCTGTACAACCAAACTCATCTACAAAATTATATCTTCCAAAAGTCAATAGATCAAGTGGAGCTGTTATAGACATGTGGATTAAGGCAAAAGAGCTCGAGGCAAATTCTGAGTATTACATTGACCTGTTGGCAAAAGGGACAGGGAAATCAAAGGAAGAAATCACTAAAGATGTCCAGAGGCCTAAGTATCTTCAAGCACAGCAAGCTATAGACTACGGACTTGCTGACAAAATAATTGATTCAAGTTCAACGGATGCTGCATTTGAGAAGCGGAATTATGAAGCCATGCTTGCTCAATCAAGTGCTTCGAGGAATCAAGCTGGTGGCAATCCTCAAGAGTCTCCTTCAGGATTCAGGTAA 1119 0.4272 MSSSPSLSLSVSSIHGSSFLHGTKFFPLSRRVTPRAFNSSSAKCSLDHIPKQFRKDNLKDGLTENYKNVPQYLYGLSPSQMDMFMTEDNPARRQSEKVTEESISSAKNYIDNGGMWSLSGMAKNGPSKYSMSVSMYQGGRGGDRPDTAPPDLPSLLLDARICYLGMPIVPAVTELVIAQFMWLDYDNPTKPIYLYINSSGTQNEKNETVGSETDAYSIADMMSYVKADVYTVNCGMAFGQSAMLLSLGTKGYRAVQPNSSTKLYLPKVNRSSGAVIDMWIKAKELEANSEYYIDLLAKGTGKSKEEITKDVQRPKYLQAQQAIDYGLADKIIDSSSTDAAFEKRNYEAMLAQSSASRNQAGGNPQESPSGFR* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0455 372 MobiDBLite consensus disorder prediction 352 372 - -
Pvu7g0455 372 PRINTS Clp protease catalytic subunit P signature 151 166 IPR001907 GO:0004176|GO:0004252|GO:0006508
Pvu7g0455 372 PRINTS Clp protease catalytic subunit P signature 191 211 IPR001907 GO:0004176|GO:0004252|GO:0006508
Pvu7g0455 372 PRINTS Clp protease catalytic subunit P signature 231 248 IPR001907 GO:0004176|GO:0004252|GO:0006508
Pvu7g0455 372 PRINTS Clp protease catalytic subunit P signature 310 329 IPR001907 GO:0004176|GO:0004252|GO:0006508
Pvu7g0455 372 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 38 364 IPR023562 -
Pvu7g0455 372 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 1, CHLOROPLASTIC 38 364 - -
Pvu7g0455 372 CDD S14_ClpP_2 151 331 IPR001907 GO:0004176|GO:0004252|GO:0006508
Pvu7g0455 372 SUPERFAMILY ClpP/crotonase 146 335 IPR029045 -
Pvu7g0455 372 Pfam Clp protease 153 334 IPR023562 -
Pvu7g0455 372 Gene3D - 129 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0455 Pvu-Chr7 3545155 3549145 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0455 K01358 - gmx:100820008 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0455 7 3545155 3549145 Pvu7g0455 7 3545155 3549145 ECH