Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0440 ATGAAAGGCATAGTGAAGAGCTCCAAACTGAAGTTCGGCATACCCGCATTTTTCTTCCTTTGCTCCCTTTTCTTCTTTGATTTGGATGATGTGGGATCGAAGTCAAGAATACTCCAAGAATCGGAGAAGAAAGTATATGAACCTGTTGAACATGGTGAATCCGGGGAATCCTTTTTTGATTCAATCCCATTTCAGATTTTAAGTTGGAGACCACGGGCTGTTTACTTTCCAAACTTCACAAGTGTGGAAGCATGTCAGCAAATAATTGAAATGGCAAGGCCAAAACTTGAACCATCAAAACTGGCTTTGCGGAAAGGAGAAACTGCTGAGAGCACAAAAGACACTAGAACAAGTTCAGGCACATTTATCAGTGCATCAGGAGACAAATCTGGCATCTTAGACATGTTAGAGAGGAAAATTGCTAAAGTTACAATGATTCCAAGGAGCCATGGAGAAAAATTCAATATATTGAAGTATGAGGTTGGCCAGAAATACGATTCTCATTATGATGCGTTCAACCCAGATGAATACGGCACTGTTAATAGCCAAAGGATTGCTTCCTTTCTGTTATACCTATCAAATGTTGAAGCAGGAGGAGAAACAATGTTCCCTTTTGAGGGTGGTTTGCATATTGATACGGATTATGATTACCGAAAATGCATTGGTTTGAAGGTGAAGCCACGGCAGGGCGATGGACTTTTATTTTATTCACTGTTACCAAACGGGAATATTGATAAGACTTCTCTTCATGGAAGTTGTCCAGTGATTAAGGGAGAGAAATGGGTGGCAACAAAGTGGATTGATGATAAAGAGCAATAG 819 0.4017 MKGIVKSSKLKFGIPAFFFLCSLFFFDLDDVGSKSRILQESEKKVYEPVEHGESGESFFDSIPFQILSWRPRAVYFPNFTSVEACQQIIEMARPKLEPSKLALRKGETAESTKDTRTSSGTFISASGDKSGILDMLERKIAKVTMIPRSHGEKFNILKYEVGQKYDSHYDAFNPDEYGTVNSQRIASFLLYLSNVEAGGETMFPFEGGLHIDTDYDYRKCIGLKVKPRQGDGLLFYSLLPNGNIDKTSLHGSCPVIKGEKWVATKWIDDKEQ* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0440 272 Gene3D q2cbj1_9rhob like domain 64 268 - -
Pvu7g0440 272 Pfam 2OG-Fe(II) oxygenase superfamily 155 267 IPR044862 -
Pvu7g0440 272 PANTHER TYPE 1 PROLY 4-HYDROXYLASE 9 272 - -
Pvu7g0440 272 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 148 269 IPR005123 -
Pvu7g0440 272 SMART p4hc 71 268 IPR006620 GO:0005506|GO:0016705|GO:0031418
Pvu7g0440 272 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 9 272 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0440 Pvu-Chr7 3451954 3454979 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0440 K00472 - gmx:100811068 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0440 7 3451954 3454979 Pvu7g0440 7 3451954 3454979 ECH
Pvu2g0134 2 1487864 1494663 Pvu7g0440 7 3451954 3454979 PCT