Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0436 ATGGCACAAAAGCTTTCTTTCTCTCCTATCCTCCCACACCCAGCACCACCCACACCCACACCGTCAACCACCGCATTCCCGAACCCCCCTTCTCCCACACGCATAACCATAACCCCTCTTCTTCGAAACCTCTCTTTTAACCAAAAACCCTCTTCTCCGACTCGTCTACCCCTCACCACCTCCTCCCACCCTACGCCCCGCCTCTCCCCTCAGGCTCACCGGATTCTCCAAACCCTAATCCACCCTTCCTTCGATTCCAATCGCTTCCACCAAATCATTTCTCTCCTATTCAACCAACCCGCTTCCTCCACTCTCTCCTTCGACGTTCTCGGCATAATCAAGGGTTTAGGGTTTAACAACAAGTTTGACCTCGCATTGTCCGTCTTCGACTTCATTCGAACCCGAAACGACCTCGTTTCGCTCTTGAACGGTTCCGTCATTGCCGTTATTGTCACCCTTCTTGGGAAAACGGGTAGGGTTTCCCGCGCAGCCTCGCTGCTGCACGATCTAGAAACCGACGGGGTTGAGGTTGATGTGTACGGCTACACCTCCCTCATAACTGCTTATGCAAATAATAGAAAATACAGAGATGCACTCAAGGTGTTTGGCAAAATGAAAGAAGAGGGGTGTGAACCCACCTTGATTACTTACAATGCAATTTTGAATGTTTACGGGAAGATGGGCGTCCCTTGGACTACGATCATTGCTCTTGTTCAGGATATGAAGTCCCGTGGCCTTGCCCCTGATTTGTGTACTTATAATACCCTTATAAGTTGTTGTAGGGCAGGTTCTTTGTATGAAGAGGCTCTTGATCTTTTTAAGGAGATTAAGGTGGCTGGATTTGCGCCTGATGTGGTCACTTATAACGTGCTGTTGGATGTTTATGGTAAGTCCAGGCGGCCGAAGGAAGCCATGGAGGTTCTGAAACAGATGGAGATTAATGGTTTTCGGCCTAGCGTTGTTACTTACAACTCTTTGGTGTCGGCTTATGTTAGAGGTGGCTTTCTGGAGGATGCCTTGGAGCTTAAAAGGGAAATGGTGGAGAAAGGGATTAAGCCTGATGTTTACACTTATACTACGCTTTTGTCAGGGTTTGTGAAGGCTGGGAAAGATGAGCTTGCAATGGAAGTGTTTGAGGAAATGAGAGAGGTGGGGTGCAAGCCTAATATATGCACCTTTAATGCGCTTATTAAGATGTATGGTGACAGAGGAAAGTTTGAGGAAATGGAGAGAGTTTTTAAGGAGATCAAGGTGTGCGGGTGTTCCCCTGATATTGTTACTTGGAATACACTTTTGGCAGTTTTTGGACAAAAGGGAATGGACTCTGAAGTGTCAGGAGTTTTTGAAGAAATGAAGAGAGCTGGGTTTGTGCCGGAGAGGGACACCTTCAACACTCTGATAAGTGCGTATGGCAGGTGTGGTTTATTTGACCAAGCTATGTCTGTTTATAAGAGAATGCTGGAGGCTGGAGTGAGTCCTGATCTTTCTACTTACAATGCTGTTTTGGCAACATTGGCTCGAGGAGGGCTTTGGGAACAGTCTGAGAAAGTCCTTGCTGAAATGAAAGATGGTGGATGTAAACCCAACGAGGCAACATATTCTTCTTTGCTCCATGCTTATGCCAATGGAAGAGAGGTTGAAAGGATGAATGCTCTAGCAGAGGAAATATACTCTGGAAGAATTAAAACGCATGCTGTTCTTTTGAGCACACTTGTTCTAGTAAATAGCAAGGTTAATCTTGTAGTGCAAACTGAACGTGCATTTTTGGAGTTTATGAAGAGAGGAATCTTGCCGGATATTACTACTATGAAGGCAATGCTTTCCATTTATGGGAGGAAGAATAAGAAGGGACCCAAAGCCAATGAGATTTTAAACTACATGTATGAGAGTGGATTGACTCTAAGTTTGACTGCTTATAATGGCTTGATGTATATGTATAGCCGCACGGAAAATTTTCAAAAGTCAGAGCAAATCTTGAGGGAAATTCCGGATAAAGGTATTGAACCAGATGTTATCTCATACAACGTAGTTATTTATGCATATTGCAGAAATCGGATGATGGAGGAGGCAAAAAGGATATTTGAAGAAATGAAAGATCCTGCTCCTGCTCCGGATGTTGTAACTTACAATACATTTATAGCAACTTACGCAGCTGACTCAATGTTTGTGGAGGCTATTGATGTAGTTCGGCATATGATCAAGCAAGGATGTAGGCCAAACCAGAATACTTACAACTCCATAGTTGATTGGTACTGTAAGCTCAAGTTGCGAGATGAGGCATGCCATTTTGTTCAAGACCTTGGCAACCTTGATCCACATATTGCTGAGGATGAAAAGAGCAGATTACTTGAGCGCATAGCAAAGAGATGGTCACAAGTTAAGCCATGA 2388 0.446 MAQKLSFSPILPHPAPPTPTPSTTAFPNPPSPTRITITPLLRNLSFNQKPSSPTRLPLTTSSHPTPRLSPQAHRILQTLIHPSFDSNRFHQIISLLFNQPASSTLSFDVLGIIKGLGFNNKFDLALSVFDFIRTRNDLVSLLNGSVIAVIVTLLGKTGRVSRAASLLHDLETDGVEVDVYGYTSLITAYANNRKYRDALKVFGKMKEEGCEPTLITYNAILNVYGKMGVPWTTIIALVQDMKSRGLAPDLCTYNTLISCCRAGSLYEEALDLFKEIKVAGFAPDVVTYNVLLDVYGKSRRPKEAMEVLKQMEINGFRPSVVTYNSLVSAYVRGGFLEDALELKREMVEKGIKPDVYTYTTLLSGFVKAGKDELAMEVFEEMREVGCKPNICTFNALIKMYGDRGKFEEMERVFKEIKVCGCSPDIVTWNTLLAVFGQKGMDSEVSGVFEEMKRAGFVPERDTFNTLISAYGRCGLFDQAMSVYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEATYSSLLHAYANGREVERMNALAEEIYSGRIKTHAVLLSTLVLVNSKVNLVVQTERAFLEFMKRGILPDITTMKAMLSIYGRKNKKGPKANEILNYMYESGLTLSLTAYNGLMYMYSRTENFQKSEQILREIPDKGIEPDVISYNVVIYAYCRNRMMEEAKRIFEEMKDPAPAPDVVTYNTFIATYAADSMFVEAIDVVRHMIKQGCRPNQNTYNSIVDWYCKLKLRDEACHFVQDLGNLDPHIAEDEKSRLLERIAKRWSQVKP* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 354 388 IPR002885 -
Pvu7g0436 795 MobiDBLite consensus disorder prediction 47 67 - -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 635 669 IPR002885 -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 249 283 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 707 740 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 356 390 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 426 458 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 497 530 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 321 355 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 638 671 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 286 319 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 391 425 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 251 285 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 672 698 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 215 249 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 462 494 IPR002885 -
Pvu7g0436 795 TIGRFAM PPR: pentatricopeptide repeat domain 182 213 IPR002885 -
Pvu7g0436 795 Gene3D Tetratricopeptide repeat domain 574 700 IPR011990 GO:0005515
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 178 212 IPR002885 -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 284 318 IPR002885 -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 213 248 IPR002885 -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 319 353 IPR002885 -
Pvu7g0436 795 MobiDBLite consensus disorder prediction 1 32 - -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 705 739 IPR002885 -
Pvu7g0436 795 Gene3D Tetratricopeptide repeat domain 231 330 IPR011990 GO:0005515
Pvu7g0436 795 Gene3D Tetratricopeptide repeat domain 461 561 IPR011990 GO:0005515
Pvu7g0436 795 Gene3D Tetratricopeptide repeat domain 68 230 IPR011990 GO:0005515
Pvu7g0436 795 Pfam Pentatricopeptide repeat domain 411 471 IPR002885 -
Pvu7g0436 795 Pfam Pentatricopeptide repeat domain 342 403 IPR002885 -
Pvu7g0436 795 Pfam Pentatricopeptide repeat domain 591 646 IPR002885 -
Pvu7g0436 795 Pfam Pentatricopeptide repeat domain 165 227 IPR002885 -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 494 528 IPR002885 -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 459 493 IPR002885 -
Pvu7g0436 795 MobiDBLite consensus disorder prediction 10 32 - -
Pvu7g0436 795 Pfam PPR repeat 665 698 IPR002885 -
Pvu7g0436 795 Pfam PPR repeat 244 276 IPR002885 -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 424 458 IPR002885 -
Pvu7g0436 795 Pfam PPR repeat family 493 542 IPR002885 -
Pvu7g0436 795 Pfam PPR repeat family 283 331 IPR002885 -
Pvu7g0436 795 Pfam PPR repeat family 704 753 IPR002885 -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 389 423 IPR002885 -
Pvu7g0436 795 Gene3D Tetratricopeptide repeat domain 334 460 IPR011990 GO:0005515
Pvu7g0436 795 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 260 609 - -
Pvu7g0436 795 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 112 477 - -
Pvu7g0436 795 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 580 769 - -
Pvu7g0436 795 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 670 704 IPR002885 -
Pvu7g0436 795 Gene3D Tetratricopeptide repeat domain 701 771 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0436 Pvu-Chr7 3419734 3422546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0436 265 789 Glycosyltransferase AT1G05670 23.574 2.98e-47 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0436 - - gmx:100813079 1305.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0436 7 3419734 3422546 Pvu7g0436 7 3419734 3422546 ECH