Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0434 ATGACCGTCGACATCCAGACCTTGGAAGACAGGTATATTGATTCTTGCAGGAGACAGGGTGTTTTGCCTAATTCTTCTATTTTGTCAAGTCTTTTCAAGGCTGAGGTAAAAAAGTCCAATCATGAGCTGTGCAAGCTGGAGATTTTAATTGATGACCTAAAGGATGTTGATATTGCTCCACTTCTTAACTTGTGCATGAACTTTGATGCTTCTGAAATAGAAGCTGTTGATGTACGTAATGAATCATCGTGTGTATTAAATGGAGAATATGCATTATCATTGATGCGTGCTGTCAATAAAAAGCTTCGAGTAGTCCATCTACAGGATCTGTCATATGGAAAAGACTTCTTACGGGATATTTCACAAAGAGGTTTGGCATGCCAAGTTTTGACATTGAGGTGCTCACGTTTCCGGAAGCTGAACTTAACGGGGGAGTTCATGCATATGCATACCCTAAATCTTGATTTCAGTTCTTCCCTTACCAGTTTCCAGGAGGATTGTTTTAATTGTATGCCCAATCTAATGCGTCTCTCAATGTGTGATACAAGGATTACAAATCTTTGGACAACTGTTGCAGCTCTCTCTAAGCTTCCTTCTTTAATTGAATTAAGGTTTCAATATTGGCAGTATTGCAATGATGCTGGAACATCTTTTATCTCATGCAGTGGGAAGTCTGATGACACTACTGATTTTAGCCTGCTTGATAGAATTCCTTTTATTGGTGAACCCTTCACCAGTACAACTGAACTGACAGATCCCAACTTTAATTCTGAAGATCCACTAAGAAATTTTTATTCCTTGGATGAAGAAATTATAAATCATGATGTTCAAAGCATGGTTGAGGATTCGTCAGATGACAGTGAAGTTGACTTTACTAGTCGTCATGATAGATACTGGTTGTCAGATGTTTTTCCTGGGTGGAGTTCTGAAGTGCCTCTTCTTCATGAGAATGAAGATGAAGAAGATTCATTGCAAGGCACTTTTATGGAACCTATTGCTGATGTTTCTATGAAGTACATGTCTCGTCATGCATCACCAATATGCTATGAGAAGCATTACAGGGAGTTCATGATTGCTTCATTGCCAAATCTGAAAAATTTAGATAATATGCCTATCAGAAAGATTGACAAGGAAAGGGCTACTGGAATATTTTCTCAATACTTTGAATATCTTCCGTATAAATGGAAGCACAAAGAGAGCGTTGTAAGTATCTTACAAAAGAGAGAAATAAAATCAGGCCATAATAAGGTGCACTCTTCCAAGAATAGGACATCATATCCCTCTGGACAATCACAATATTTTTATACTAGGTCTCTTTCAGCTGCTAAATTGGGGTCCTCAACTTGGCCTTTCTTGCATCCCCTTTCTCTATTAGGATGTGAATTGGACAAGGGCTTTCATCCAAGACAGTTTGAGTACCATCCATCTGACTCAAGTTTGATGGTCTTTGGAACTTTAGATGGTGAAGTAGTTGTCATCAACCATGAGAACGAACATATTGTTAGTTATATTCCATCACTTGGAGCAATGAATAGTGTTTTAGGTCTCTGTTGGCTCAAAAAATATCCCTCTAAGCTTATAGCAGGATCAGACAATGGTTCCTTGAAATTGTATGACATCCACCACATACCAAGAAAAGTTACTGGCATACATGGGAATTTTGGTTGTGTTACGTTTGATGAATTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTACTCAAGAAATGTTGCTTTATATGACATCAACAGTGGGAAACGTTTACAAGTGTTCACAGATATGCATCGTGGGCATATTAATGTAGTCAAGTTTGCTAATCATTCCCCATCAATTTTTGCCACTTCATCATTTGATCACGATGTGAAGATGTGGGACTTGAGACAAAAGCCAATACACCCATGCTTTACAGTTTCAAGCTCCAGAGGTAATGTGATGGTTTGCTTTTCTCCAGATGATCAATATATTCTTGCTTCAGCGGTTGATAATGAGGTTAGACAATATCTGGCTGTTGATGGTAAGCTTCACTTAGTTTTTGATATAGCTCCCACTGAAAGTTCCCAAAATTACACCCGTTCTTATTACATGAATGGGAGAGACTACATCATAAGTGGGAGTTGTGACGAGCACGTCCGTATTTGCTGTGCTCAAACAGGGAGGCGCCTGAGAGATATATCCCTCGAGGGAAGAAACTTAGGAAGTTCTGTGTTTGTTCAGTCTTTGAGGGGTGATCCTTTCCGGGATTTCAATATGAGCGTGTTAGCAGCTTACATGCGGCCAGGCTCCAAGTCTAAAATTGTCAAGGTTTAA 2334 0.3907 MTVDIQTLEDRYIDSCRRQGVLPNSSILSSLFKAEVKKSNHELCKLEILIDDLKDVDIAPLLNLCMNFDASEIEAVDVRNESSCVLNGEYALSLMRAVNKKLRVVHLQDLSYGKDFLRDISQRGLACQVLTLRCSRFRKLNLTGEFMHMHTLNLDFSSSLTSFQEDCFNCMPNLMRLSMCDTRITNLWTTVAALSKLPSLIELRFQYWQYCNDAGTSFISCSGKSDDTTDFSLLDRIPFIGEPFTSTTELTDPNFNSEDPLRNFYSLDEEIINHDVQSMVEDSSDDSEVDFTSRHDRYWLSDVFPGWSSEVPLLHENEDEEDSLQGTFMEPIADVSMKYMSRHASPICYEKHYREFMIASLPNLKNLDNMPIRKIDKERATGIFSQYFEYLPYKWKHKESVVSILQKREIKSGHNKVHSSKNRTSYPSGQSQYFYTRSLSAAKLGSSTWPFLHPLSLLGCELDKGFHPRQFEYHPSDSSLMVFGTLDGEVVVINHENEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHHIPRKVTGIHGNFGCVTFDEFDQLTSVHVNSTDELFLASGYSRNVALYDINSGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDHDVKMWDLRQKPIHPCFTVSSSRGNVMVCFSPDDQYILASAVDNEVRQYLAVDGKLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHVRICCAQTGRRLRDISLEGRNLGSSVFVQSLRGDPFRDFNMSVLAAYMRPGSKSKIVKV* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0434 777 SMART LRRcap_2 350 368 IPR003603 -
Pvu7g0434 777 SUPERFAMILY L domain-like 126 221 - -
Pvu7g0434 777 Gene3D Ribonuclease Inhibitor 99 383 IPR032675 -
Pvu7g0434 777 Gene3D - 467 752 IPR015943 GO:0005515
Pvu7g0434 777 ProSiteProfiles Trp-Asp (WD) repeats profile. 601 636 IPR001680 GO:0005515
Pvu7g0434 777 PANTHER BNAC09G30780D PROTEIN 2 775 IPR046377 GO:0071493|GO:0080008
Pvu7g0434 777 Pfam WD domain, G-beta repeat 605 634 IPR001680 GO:0005515
Pvu7g0434 777 SUPERFAMILY WD40 repeat-like 467 733 IPR036322 GO:0005515
Pvu7g0434 777 SMART WD40_4 639 677 IPR001680 GO:0005515
Pvu7g0434 777 SMART WD40_4 555 590 IPR001680 GO:0005515
Pvu7g0434 777 SMART WD40_4 497 539 IPR001680 GO:0005515
Pvu7g0434 777 SMART WD40_4 593 634 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0434 520 720 Miscellaneous Gene Families AT5G08390 23.762 1.84e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0434 - - gmx:100806443 1462.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0434 7 3389083 3397604 Pvu7g0434 7 3389083 3397604 ECH