Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0190 ATGGGAGTTCAACGGCATGAAGCGCTTGCTGAAGACGAGCCTGCTGAAAATGCTTTTGCTAGTAGTTCTTTGAACCAAGGTGCTCTTCCCAGTGAGTCTGCGAAGAGCAATCCATGTGTAAATACTGAAAGTAGTGAAGTTAATGAATCGGGTGACGTTTCTTATAAGAAAAGCAATACATCACATATCTATAGACAAGATGTTGTGAAAAATAATACCAGTGGCATGATTGGGATTGTGACAGAAGTCGCCGGTGATTCAGATTCAGATTCAGATAGTAGCATCACTGATGATGAGAATGATAGTGAGGATGAGGATGGTGATGGTGAGGAAGGCGATGATAGTAATAATGCTAGCAGGAACTCTGAAAGTAATGTTTCTGCTGGGCATTGTAAAACTGATGCACTTCTGGCTGACCAGCTGCGTGTACTGTGGATGGACGAGTCTGAATCCACTCAAAATTTCAGTGACGTTGAAGTTGTTGATCGTGGATTTTTACATGGTGATTTTGTTGCTGCGGCTTCAGACCCTACTGGGCAAGTGGGTGTGGTGGTTGATGTCAATATATGTGCGGATCTGTTGTCCCATGATGGATCTATAATAAAAGATGTCTCGTCAAAAAACATAAGGCGTATTAGGGATTTCACTGTTGGTGATTATGTGGTGCTTGGGCCCTGGCTAGGCAGAGTCGACGATGTTTTGGATAATGTAACTGTCTTATTTGATGATGGTTCAGTTTGTAAAGTTTCGAAAGCAGATCCATTGAATCTTAAACCAATTTCTAAGAATATTCTTGAAGATGGGCATTTTCCTTATTACCCAGGGCAACGGGTAAGGGCTAGCTCCTCATCAGTTTTCAAGAATTCAAGATGGCTGTCTGGCTTGTGGAAAGCTAATAGGTTAGAAGGTACTGTAACTAAAGTTACAGTTGGATCAGTGTTTGTTTATTGGATAGCATCTGCAGGTTATGGGCCATATTCTTCTACTGCCCCAGCAGAGGAGCAGAGCCCAAAAAACTTAAAATTGTTGTCTTGTTTTTCTCATGCAAATTGGCAATTGGGTGACTGGTGTCTCTTACCCTCATCAGTACTGTCATCCTCAGCTTCCATGGACAAAGGCATATCAAAATTGGAACTTAACGATTCTGCTAACAATGAATTAGATTCTAATCAGACTGGAAGTGGGTGTGATTCAGAAGAAGCTACTGTTGAGGAAATAAATGAGAATAAGGATACTATGGACCTTGATCCAGCTGATACTTTGGAAGGGAATGATGGACACGAGAAAAGTAATCCTTCACGTGATTCTAGCTCATGCTGCAGTTCTATCTCTGTATCAAAGGAACCTGTCCATGAAGCTTGGCCTCTTCACCGCAAGAAAATTAGGAAAGTTGTCATCAGGAAAGAAAAAAGGGCCCGAAAGAAAGAGGAAAGTTTCGAGAAAGCTCTTTTGATTGCCAACACAAGAACAAAAGTTGATGTTGCATGGCAAGATGGAACAATAGGGCATGAACTGAATTCTACAAGTTTAATTCCTATAGATAATCCTGGTGACCATGAATTCGTTTCAGAGCAATATGTGGTAGAGAAGACCTCCGATGATGGTGAGGATATTTCTGAAGCAAGGCGAGTTGGGGTGGTGAGAAGTGTTAATGCAAAGGAGCGGACAGCTTGTGTGAGGTGGTTAAAAAATGTTGCTAGAGCAGAAGATCCTCGAGAGTTTGACAGCGAGGAAATTGTAAGTGTGTATGAGCTAGAGGGCCATCCAGATTATGATTACTGCTATGGGGATGTGGTTGTTCGCCTGACACCTGTGTCTGCACATTTAGAAACAGCTTCTGTTGGAGAGTCCACTGAGAAATCGGAGCAGAAAACTGAAGAGTGTGGGATTAAAAAGGAAGCAAAAATCCAAACTGATACTAATAGAGTAGAAAATGCATCTAGTGATACTTCTGTGCAATTTTCTGACCTCTCTTGGGTTGGAAATATAACTGGCCTTAAGAATGGTGATATCGAAGTTACTTGGGCTGATGGAATGGTGTCAACGGTTGGACCCCAAGCAATCTATGTGGTTGGTCGAGACGATGATGATGAATCAATTGCTGCTGGGAGTGAAACAAGTGATGCTGCAAGCTGGGAAACTGTTAATGATGATGAAATGGAAGTCCTTGAGGATTCTAGAGAGGATATTGAGAGGGAAAATTCAAGCAGTGTCACTTCCGAGACAGAAGAAAGTGGAGAGAATGATTTTGGTAGGGCTGCTGCACTTTCTGTTCCCCTAGCAGCATTTCGGTTTGTCACTAGACTTGCCAGTGGAATATTCTCAAGGGGCCCAAAGAACTTGGATTCTACTGACATGCAGATAAAAGCTGGACATGAACATTCATCACCATTAGTTGATGACGAGTCTAGTTCTCAGAGGCTTATTCCAATTGACGGTGATACTTCAGGAAATAAGAATGGAAGATACAAGGAGGTTGTGTCGGAAGCAACTGAAAATCTGGAAGCATGTGAGGCACTCTATGGCTTGAAAAATGATGCTCTTGAAAGTTGTGATAATGGGAGTTGCAGTTTGAAACATTTTGACATAACCCAAGATCCATCAGACCACTATTTTATTGGTGCAAATGGACAGAGTAGCAACCGGAAATGGTTAAAGAAAGTGCAACAAGATTGGAACATACTGCAGAATAACCTTCCTGAGGAAATCTATGTACGAGTTTACGAAGATAGAATGGATCTCTTGAGAGCAGTTATTGTAGGGCCATATGGAACCCCTTACCAAGATGGACTCTTTTTCTTTGATTTTCACCTTCCGCCAGAATACCCTGATGTTCCACCGTCTGCATACTATCATTCTGGTGGTTGGCGAATTAACCCTAACTTGTATGAGGAAGGGAAGGTTTGTCTTAGCCTTCTAAATACATGGACAGGCAGGGGAAACGAAGTATGGGATCCAAAATCCTCTAGCATACTTCAAGTCCTAGTTTCACTTCAAGGTTTAGTACTCAATTCTAAGCCTTACTTCAATGAAGCTGGGTATGATAAGCAGATTGGGACAGCCGAAGGAGAGAAGAATTCATTGTCATACAATGAGAATACCTTTTTACTTAACTGTAAGACTATGATGTATCTTATGAGGAAACCCCCCAAGGATTTTGAAGTACTCGTCAAAGAACATTTTAGGAGGCGGGGCCATAACATCCTTAAGGCTTGTGATGCATATATGAAAGGTTGCTTGATTGGCTCGTTGACTAGAGATGCCTCCGTTAGTGAAAAAAGCGGCCAGAATTCAACCTCTGTTGGTTTCAAGTTGATGTTAGCCAAGATAGTGCCAAAGCTTTTTCTGTCACTTAGTGAGGTTGGAGCTGATTGCGAGGAATTTAGGCATCTCAAAGATTTGTAG 3405 0.4191 MGVQRHEALAEDEPAENAFASSSLNQGALPSESAKSNPCVNTESSEVNESGDVSYKKSNTSHIYRQDVVKNNTSGMIGIVTEVAGDSDSDSDSSITDDENDSEDEDGDGEEGDDSNNASRNSESNVSAGHCKTDALLADQLRVLWMDESESTQNFSDVEVVDRGFLHGDFVAAASDPTGQVGVVVDVNICADLLSHDGSIIKDVSSKNIRRIRDFTVGDYVVLGPWLGRVDDVLDNVTVLFDDGSVCKVSKADPLNLKPISKNILEDGHFPYYPGQRVRASSSSVFKNSRWLSGLWKANRLEGTVTKVTVGSVFVYWIASAGYGPYSSTAPAEEQSPKNLKLLSCFSHANWQLGDWCLLPSSVLSSSASMDKGISKLELNDSANNELDSNQTGSGCDSEEATVEEINENKDTMDLDPADTLEGNDGHEKSNPSRDSSSCCSSISVSKEPVHEAWPLHRKKIRKVVIRKEKRARKKEESFEKALLIANTRTKVDVAWQDGTIGHELNSTSLIPIDNPGDHEFVSEQYVVEKTSDDGEDISEARRVGVVRSVNAKERTACVRWLKNVARAEDPREFDSEEIVSVYELEGHPDYDYCYGDVVVRLTPVSAHLETASVGESTEKSEQKTEECGIKKEAKIQTDTNRVENASSDTSVQFSDLSWVGNITGLKNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESIAAGSETSDAASWETVNDDEMEVLEDSREDIERENSSSVTSETEESGENDFGRAAALSVPLAAFRFVTRLASGIFSRGPKNLDSTDMQIKAGHEHSSPLVDDESSSQRLIPIDGDTSGNKNGRYKEVVSEATENLEACEALYGLKNDALESCDNGSCSLKHFDITQDPSDHYFIGANGQSSNRKWLKKVQQDWNILQNNLPEEIYVRVYEDRMDLLRAVIVGPYGTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQIGTAEGEKNSLSYNENTFLLNCKTMMYLMRKPPKDFEVLVKEHFRRRGHNILKACDAYMKGCLIGSLTRDASVSEKSGQNSTSVGFKLMLAKIVPKLFLSLSEVGADCEEFRHLKDL* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0190 1134 CDD UBCc 886 1036 IPR000608 -
Pvu7g0190 1134 Pfam Ubiquitin-conjugating enzyme 888 1032 IPR000608 -
Pvu7g0190 1134 MobiDBLite consensus disorder prediction 1 62 - -
Pvu7g0190 1134 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 23-RELATED 56 1132 - -
Pvu7g0190 1134 SUPERFAMILY UBC-like 864 1050 IPR016135 -
Pvu7g0190 1134 MobiDBLite consensus disorder prediction 383 402 - -
Pvu7g0190 1134 Gene3D Ubiquitin Conjugating Enzyme 851 1114 IPR016135 -
Pvu7g0190 1134 MobiDBLite consensus disorder prediction 18 62 - -
Pvu7g0190 1134 MobiDBLite consensus disorder prediction 383 398 - -
Pvu7g0190 1134 MobiDBLite consensus disorder prediction 792 816 - -
Pvu7g0190 1134 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 883 1043 IPR000608 -
Pvu7g0190 1134 MobiDBLite consensus disorder prediction 91 112 - -
Pvu7g0190 1134 MobiDBLite consensus disorder prediction 723 750 - -
Pvu7g0190 1134 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 56 1132 - -
Pvu7g0190 1134 MobiDBLite consensus disorder prediction 407 442 - -
Pvu7g0190 1134 MobiDBLite consensus disorder prediction 407 432 - -
Pvu7g0190 1134 MobiDBLite consensus disorder prediction 82 128 - -
Pvu7g0190 1134 SMART ubc_7 886 1043 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0190 Pvu-Chr7 1290400 1297874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g0190 162 362 Miscellaneous Gene Families AT2G33770 42.574 8.99e-50 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0190 K10581 - gmx:100809513 1902.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0190 7 1290400 1297874 Pvu7g0190 7 1290400 1297874 ECH