Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0179 ATGGTGGGTAGCCCAAAGAAAGTGTCACCATCAACAAGAAGCCCAAAGAAAAGCTCAAGAACTCTGCAAGATCTCTTTGTGCAGGAAAGTCCTCACTTCACCATCACATCTTCTTCCCCCACTTCAGGAAATGAAGAACTTCTCTCCACAATTTCTTACTGCACATTTGTCTTCACCTTCACTGACCCTTCAGAATCTCCTGCACAAAGAGACTCAAAGAGGCTTCAGCTCACAAGACTCGTCTCTATATTGAAGTCTTCAAAGAAAGCAGTGCATGGAAAAGTTCTGGTGGCTCTGGTGACCATGATATCTGCCAACCTCTTCAGGCCACTCCCTCCACCTTCCAGCCCCTCTGCAATCACAGATTTGCCCGAAGAAGATGACCCCATCTCTGTATTTTCTCCTCTGTGGTCACATCTCCAAATAGTATACGAGATTCTTCTCAAGCTTGTTAACAGCACAGAGCAAAAGATGCTGAGAGAGTGCATGGATCACTCTTTCCTCCGCAACCTGCTAGCACTGTTCCAGTCAGAAGATCCAAGGGAGCGTGAGACTTTGAAAAATGTGTACCACAAGATGTATTCCAAGTTCATATGTGATCGTTCCTTGATGAGGAAATCGATGACAGAGGTGCTCTTGAACTACGTTTTTGAGACAGAGAAGCATCCGGGTATTGCAGAGTTGCTTGAGATATGGGGAACCATAATCAATGGGTTTACAGTGCCACTGAAGGAAGAGCACAAGCTGTTCCTGATGAGAGTGTTGATTCCTCTGCACAAAACGAAAGGGATGCAAGTGTACCACAGGCAATTGGCCTATTGCGTGTCACAGTTTGTGCAGAAGGAGCCTATGCTTGGAGGGGTTGTTGTGAGAGGGATTTTGAGGTATTGGCCTGTCACAAACTGTCAAAAAGAAATTTTGCTAATTGGGGAGTTGGAAGATCTTGTTGAGAATTTAGACCCTGACCAGTATCGGAAGTTGGCCTTGCCCTTGTGTACCCAGATTACCAAATGCATAAACAGTTGGAATTCCCAGGTAGCGGAGCGTGCACTGTATGTGTGGAACAATGAGCAGTTCGTGAAAATGGCACTGATAGGAACAGTGGAAGTGTTTAATGTGATTGTAGAAGGCATGGAAAAGAACCTGAAGTGGCATTGGAGCAAGAGCGTTAGGCAACTAACAGAAAGTGTTAAGGTGATGCTGGAAGAAATGGACCCAGATCTGTATTCCAAGGGTCTCATGGACATGGAAGCTAAAGAATCAATGGCACATCAAGAAGATATCAAAAGAAAAAAGAGATGGGAAAGAATAGAATTGGAAGCTGCCAAGAATCAGTTTCTCAACCCACAACGTTATATACGAGTCTCCTACTGA 1374 0.4476 MVGSPKKVSPSTRSPKKSSRTLQDLFVQESPHFTITSSSPTSGNEELLSTISYCTFVFTFTDPSESPAQRDSKRLQLTRLVSILKSSKKAVHGKVLVALVTMISANLFRPLPPPSSPSAITDLPEEDDPISVFSPLWSHLQIVYEILLKLVNSTEQKMLRECMDHSFLRNLLALFQSEDPRERETLKNVYHKMYSKFICDRSLMRKSMTEVLLNYVFETEKHPGIAELLEIWGTIINGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYHRQLAYCVSQFVQKEPMLGGVVVRGILRYWPVTNCQKEILLIGELEDLVENLDPDQYRKLALPLCTQITKCINSWNSQVAERALYVWNNEQFVKMALIGTVEVFNVIVEGMEKNLKWHWSKSVRQLTESVKVMLEEMDPDLYSKGLMDMEAKESMAHQEDIKRKKRWERIELEAAKNQFLNPQRYIRVSY* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0179 457 Gene3D - 40 439 IPR011989 -
Pvu7g0179 457 SUPERFAMILY ARM repeat 45 419 IPR016024 -
Pvu7g0179 457 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 10 442 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pvu7g0179 457 MobiDBLite consensus disorder prediction 1 20 - -
Pvu7g0179 457 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 36 441 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pvu7g0179 457 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 10 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0179 Pvu-Chr7 1176924 1179412 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0179 K11584 - gmx:100802007 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0179 7 1176924 1179412 Pvu7g0179 7 1176924 1179412 ECH