Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0175 ATGAACAAGAGGCCTATAACCGCCGTTTACAAGGCCCTTCCTGATCTCTGCCATCGAGAACTCGGCCATCTACCACCCAGAAATTTCGCTCTTCGCTTTGGCGCCTCTGAGGATCTTGTCCTTCGACTTGATGTGCTCAGGAAACTGCAAAAGCACAGGGGTTGTGTCAACACTGTTAGCTTCAACACTGATGGGGACGTTCTGGTGTCCGGTTCTGACGATTGGAGGGTTATTCTGTGGGACTGGCAAACTGGCTCTATCAAACACTCCTTCCATTCTGGTCACAGTAACAATGTTTTCCAGGCCAAGATCATGCCTCACTCTGAGGATCGAAGCATTGTCACCTGTGCTGCTGATGGACAGGTTAGACATGCTCAAATTCTTGAAAATGGAGGAGTGGACACTAAGTTTCTGGCCAAGCATCAAGGAAGGGCTCATAAATTGGCTATCGAACCTGGCAGCCCTCATATATTTTATACCTGTGGTGAAGATGGATTAGTACAGCATTTTGATCTCAGAATTGGGGTCGCAACAGAACTTTTTACATGCCAGCCAATCAAGGATAGACGGAACTATATGCCGGTCATCCATCTTAATGCTATTGCAATTGATCCAAGGAACCCAAATCTCTTTGCCGTTGCTGGGTCTGATGAATATACTAGACTTTATGATATTCGCAAGTATAAATGGGATGGATCTACTGATTTTGGTCAACCAACCGACTTCTTTTGTCCTCCTCACTTGATTGGTGACGACCGGGTTGGAATAACAGGCTTGGCCTTTTCTGAACAAAGAGAGCTGCTTGTGTCATACAATGATGAGTTTATTTACCTTTTCACCCAAGATATGGGTTTGGGACCCAACCCTGATTTTGGGTCCCCTAAATCTATGAACTCTGATGCAGGTGAACTTGGATCTGCGCTGTCTCCATCCAACGTGGATGGTGATGAAAAAATCATCCCGCAAGTTTTTAAGGGACACAGGAATTGTGAGACAGTTAAGGGTGTCAACTTTTTTGGACCCAAGTGTGAGTATGTGGTGAGTGGGTCAGACTGTGGTCGGATTTTCGTATGGAAAAAGAAAGGTGGTCAGCTTATTCGTGTCATGGAAGCAGATAAGCATGTTGTGAATTGCATTGAGTCTCATCCTCATTCAATGGTTCTTGCAAGCAGTGGTATTGAGCATGACATCAAAATATGGACTCCAAAGGCCCTTGAGAAAGCTACTCTGCCCAAAATTATTGAGCAGAAACCAAGGGCTAGGGGCTGGATGTACCGGATTGCATCTCCTGAAGACCTGATGTTGCAACTGTTGTCACTTCCAAGACGAAGGCTTAGGACAGAAAACAATGGAGAAAACTCAACTACAGATCAAGACCTTCTACAGTTGTTACTCACATTCAATGCTAATAGTGACAGTTCTAATGATGATGATGATGATAATGATGATGATGATGATGATGATGGTGATACAACCAGTCACCATGACTTGTTCTGTTAG 1500 0.4453 MNKRPITAVYKALPDLCHRELGHLPPRNFALRFGASEDLVLRLDVLRKLQKHRGCVNTVSFNTDGDVLVSGSDDWRVILWDWQTGSIKHSFHSGHSNNVFQAKIMPHSEDRSIVTCAADGQVRHAQILENGGVDTKFLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRIGVATELFTCQPIKDRRNYMPVIHLNAIAIDPRNPNLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPTDFFCPPHLIGDDRVGITGLAFSEQRELLVSYNDEFIYLFTQDMGLGPNPDFGSPKSMNSDAGELGSALSPSNVDGDEKIIPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFVWKKKGGQLIRVMEADKHVVNCIESHPHSMVLASSGIEHDIKIWTPKALEKATLPKIIEQKPRARGWMYRIASPEDLMLQLLSLPRRRLRTENNGENSTTDQDLLQLLLTFNANSDSSNDDDDDNDDDDDDDGDTTSHHDLFC* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0175 499 MobiDBLite consensus disorder prediction 292 306 - -
Pvu7g0175 499 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 7 476 IPR045151 -
Pvu7g0175 499 Pfam WD domain, G-beta repeat 46 81 IPR001680 GO:0005515
Pvu7g0175 499 Pfam WD domain, G-beta repeat 364 400 IPR001680 GO:0005515
Pvu7g0175 499 Pfam WD domain, G-beta repeat 322 359 IPR001680 GO:0005515
Pvu7g0175 499 SUPERFAMILY WD40 repeat-like 41 400 IPR036322 GO:0005515
Pvu7g0175 499 Gene3D - 37 403 IPR015943 GO:0005515
Pvu7g0175 499 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 49 81 - -
Pvu7g0175 499 ProSiteProfiles Trp-Asp (WD) repeats profile. 49 90 IPR001680 GO:0005515
Pvu7g0175 499 MobiDBLite consensus disorder prediction 473 490 - -
Pvu7g0175 499 MobiDBLite consensus disorder prediction 289 309 - -
Pvu7g0175 499 SMART WD40_4 185 224 IPR001680 GO:0005515
Pvu7g0175 499 SMART WD40_4 242 280 IPR001680 GO:0005515
Pvu7g0175 499 SMART WD40_4 131 171 IPR001680 GO:0005515
Pvu7g0175 499 SMART WD40_4 84 126 IPR001680 GO:0005515
Pvu7g0175 499 SMART WD40_4 362 401 IPR001680 GO:0005515
Pvu7g0175 499 SMART WD40_4 317 359 IPR001680 GO:0005515
Pvu7g0175 499 SMART WD40_4 42 81 IPR001680 GO:0005515
Pvu7g0175 499 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN-CONTAINING PROTEIN-RELATED 7 476 - -
Pvu7g0175 499 MobiDBLite consensus disorder prediction 470 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0175 Pvu-Chr7 1149693 1155724 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0175 K11804 - gmx:100791300 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0175 7 1149693 1155724 Pvu7g0175 7 1149693 1155724 ECH