Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0174 ATGAATGGCTTACAGTGTCCTCAGCAAGGGCTGCTATGGAGATGGAAACAACACGGTGCCGCAGTTACCCCAGTTACAAGGATTACAATGGAAACTTCCACGCTAACCAAACAAGGCCAACGCTTTCTGACAAAGCTAACAACCTCCGCCGCCGCCGCCGACAACCTTATCCGAAGATTCGTCCAAGGTTCTCCCAAATCCGTGGTTCTCACCACTCTCTCACACCTCCTCTCACCCTCCACCTCCCATCCACATCTCTCTTCCATCGCTCTCCCTCTTTACGGAAGAGCCACCCAAGCGCCGTGGTTCACCTGGAACTCCACCACCGTGGCCGAGCTCGCCGCGCTCCTCCACGAACTGGGCCACCGGGCCCAGTCCGAAGCCCTAATTTCCGAGGCCATTTCCAAGCTACAGTCTCGCCACCGAGACCTCGTCGTTTTCTACGGGAGACTCGCGCAGGCACACTCCAAACGAAAATCCGAAACCGGCTTCGACGCGGCCCACGGTTACCTCGACGACGTCCTCCGCACGTCGGAATCGGCGCACGTGAAACGCAGGGCGTACGAGTTCATGGTGAGCGGGCTGTGTTGCATGGACAGGCCCGGCGAGGCGGAGGAATTGGTTATTGGGGCTGAGGACGGGCTTGGGCTTAAACCCTCGGGCTTTGAATTGAAGTCGATTGTGCACGGGTACGGAAGGTTGGGGTTGTTTGGGGATATGCGGAGAGTGGTGGAAGAGATGGAGAAGAGAGGGTTTGTGCTTGACACGGTTTGCTGCAACATGGTTGTTTCGGCTTACGGCGTTCACGGGGAGCATGCGGAGATGGTGCGGTGGCTCCGGAGGATGAGGGATTTGGGGGTGCCGTTTTCTGTGAGGACTTACAACTCCGTTTCGAATTGTTGCCCTAGGGTTTTGAGAATGGTGGGAGGGATGAGCGAATTGGCGTTGTCGATTGAGGAATTGGAGGAGGGTTTGGAGGGAGGGGAGGGAATGGTGGTGAGGGAGCTGCTGGGGTGTGGTGGGATTTTGGAGGAGGTGATGGTGTGGGAGACGGCGGAGGTGAAGGTGGATTTGCATGGGTTTCACCTGGGTGGGGCTTATTTGGTTGTTCTGGTTTGGTTGGAGGAGATGTGGAGGAGGTTGAATGGGTTGAGTTGTGGGGTTCCGGCGGAGGTTACGGTGGTTTGTGGGTTGGGAAATCACAGCAGGGTTTTCGGGGAATCGAAGGTGAGAGTGTTGGTGCAGAAGATGATGGTGAAGATGGGAAGTCCTTTGAAGGTTGATAGGAAGAACAATGGGTGCTTTGTTGCTAAAGGAAAAGCTGTTCAAAATTGGTTGTGTCAGATGAAGAAGGCACAATCTGCTTCAATGTGA 1374 0.5531 MNGLQCPQQGLLWRWKQHGAAVTPVTRITMETSTLTKQGQRFLTKLTTSAAAADNLIRRFVQGSPKSVVLTTLSHLLSPSTSHPHLSSIALPLYGRATQAPWFTWNSTTVAELAALLHELGHRAQSEALISEAISKLQSRHRDLVVFYGRLAQAHSKRKSETGFDAAHGYLDDVLRTSESAHVKRRAYEFMVSGLCCMDRPGEAEELVIGAEDGLGLKPSGFELKSIVHGYGRLGLFGDMRRVVEEMEKRGFVLDTVCCNMVVSAYGVHGEHAEMVRWLRRMRDLGVPFSVRTYNSVSNCCPRVLRMVGGMSELALSIEELEEGLEGGEGMVVRELLGCGGILEEVMVWETAEVKVDLHGFHLGGAYLVVLVWLEEMWRRLNGLSCGVPAEVTVVCGLGNHSRVFGESKVRVLVQKMMVKMGSPLKVDRKNNGCFVAKGKAVQNWLCQMKKAQSASM* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0174 457 ProSiteProfiles Smr domain profile. 356 440 IPR002625 -
Pvu7g0174 457 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 220 254 IPR002885 -
Pvu7g0174 457 PANTHER ATPASE EXPRESSION PROTEIN 3 27 448 - -
Pvu7g0174 457 SUPERFAMILY SMR domain-like 354 438 IPR036063 -
Pvu7g0174 457 Gene3D - 355 438 IPR036063 -
Pvu7g0174 457 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 255 289 IPR002885 -
Pvu7g0174 457 SMART SMR_2 353 440 IPR002625 -
Pvu7g0174 457 Gene3D Tetratricopeptide repeat domain 117 335 IPR011990 GO:0005515
Pvu7g0174 457 Pfam PPR repeat 226 252 IPR002885 -
Pvu7g0174 457 Pfam PPR repeat 257 287 IPR002885 -
Pvu7g0174 457 TIGRFAM PPR: pentatricopeptide repeat domain 257 288 IPR002885 -
Pvu7g0174 457 TIGRFAM PPR: pentatricopeptide repeat domain 226 256 IPR002885 -
Pvu7g0174 457 PANTHER OS02G0120000 PROTEIN 27 448 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0174 - - vra:106770803 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0174 7 1146417 1148084 Pvu7g0174 7 1146417 1148084 ECH