Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g0172 TACTTAAAGAGAGATAATGAGAAGGTTAAGAAACTTCTTCCCACATCTCTTGGTCTACTGTCATGTATTTATGGATGCAAAAGATCTGTATCTGATTCAAATATAAACGAATGCAAATTATTTGTAAATGTGAAAAGTGGAAGAACGTGTTCGACAGTAGATTGTTTACTGCAAGGTTTCTTCTGTTCAAAATGCAATGGCAATTTTATTTGCAATCTAGATGAGAAGCAAGCTCCAATCATTCTCCGTTCTGGTACACATGGAGTAGATCCAGATTTTAGTTTTGACCATACTTTCATTCAACTACAATCTTTATTTTTTGAACTTCTATTTGATGAGTCATCCGAAGATGTCCAAATTTCCTGTGTGAGAGTTATTCATCAGATCCTTGCACACGGAGCTTCTGATATTCTGCTAAAAACAAGATTGAAGTGGATAAAATGTTTGGAGTTTCTTCTTACTTGCAGGAGCAAGGAATTGAGAGAAGCATTTTGCAGTCAGATTAGATTCTTTGTGGATGATCTTATTTTGAGTTCAATTTTTGCTGGAGATGCCGATAAAAGCAAGGAAGAAAAATTTCTAGATAAAATTAAACATGCCATGACCATTGCTGGTAGTCCACATATATTGGAGACTTTAATGGAATGTACAGCAGAAATAATGGTTGCTGTCAATATAGATAGCAAACTTTTTTTATGTTCTCTTATACTGCTTGTTGATCAACTTGATAGCACACACATGACTGTAAGAATGAATGCATCACGGTTAATACACAGATCTTGCTATTTCCATCTTAAAGGAGGTCTCGAGTTAATTCTTTCAAAAGATGTTCGTATTTGTAGTGAACTGTATGATTATCTCTCTGGAAGACTTGCCAGCCGCCCAATCTTAGTGAGAGAGTTTGCGGAAGCTGTTTTTGGTGTTGAAACCAAAGAACTTGTCAAAAAAATGATTCCTTTTGTTCTCCCAAAGCTTGTTGTGTCTCAGCATAATAGTCAAGCAGTTGACACCTTATATGAGTTAGCCAAGTGTTTGAACACTGACATGGTGCCTCTGGTAGTTAATTGGCTACCAAAAGTTCTTGCTTTTTCTCTTCATCAATCCGATGACCAACAATTAATTACTGCCGTGCAGTTTTACCATGCACAGACGGGTTCTGACAAGAAGGAAATATTTGCGGCTGCTTTGCCTGCTCTTCTAGATGAACTTGTATGCTTTACAGATGGTGGCAATTCAGATGAGATAACTAGAAGGTTAGCAAGAGTGCCTCATATGATTAAAGACATTGCTAAAGTTCTCACTGGTGCAGAAGATCTCCCTCTATTTTTGAGGAATCATTTTGTAGGCCTTCTTAACAGTATAGACAGAAAATTGCTTCATGCTGATGATTTTATGCTTCAGAGGCAATCACTGAACCGTATTGAGTTGCTGATTAGGATGATGGGTTCTCATCTTAGTACTTATGTGCCAAAATTGATGGTTCTTCTCATGCATGCTATAGTTAAAGAGCCACTGCAAAAGGAGGGTCTGTCCGTCTTGCATTTTTTTATAAAGCAATTGTCTAAAGTATCTCCAGCTAGCATTAAGCATATTATTTCTCAAGTTTTTGCTTCCCTCCTACCCTTCCTGGAGAGAGACAAAGAAAATCCCTCAATACATTTGGACAAAGTGGTAACAATTTTAGAAGAACTTGTTCTTGAGAATAGGGTTATCCTAAAGCAGCATATATGTGAGTTTCCCCCATTGCCCAGCATTCCTGCTTTGACAGAAGTGAACAAAGCAATTGAGGATGCTCGTGGAACTATGACTTTGAAGGACCAATTGCGAGATGTTGTTGATGGTTTAAATCATGAGAACTTAAATGTGAGGTATATGGTAATGTGTGAGCTTCGCAAGCTTCTGGACTCAAGATGGAAGGATGTTACTGATCTGATAACTGCTGAAGCTGGTTCAGACTTGGATGTCTTGAGTTCTTTGATAACATCATTATTAAGAGGATGTGCAGAAGAATCAAGGACCACTGTTGGGAAGCGGCTGAAGTTAGTCTGTGCTGACTGTCTTGGATCCCTTGGTGCTGTTGATCCTGCAAAAGTAAAAGGTTTTTCATGTCAGCGTTTCAAAATTCAATGCTCTGATGATGACCTCATATTTGAACTGATACACAAACATCTAGCTCGAGCATTTAGATCTGCACCCGATACTGTTATTCAAGACTCTGCTGCATTGGCTATACAGGAGTTGCTAAAATTTGCTGGTTGTGAGGCATCGTTGGATGAAAGTGCTCCAACCACTACGTCACAGACACAAAAGGATGAAGATAATCGCAAAGCTGTTGTATCTAAGATTAAGAGTACTAATGGTAGTAAAGGGATGAATAACAGGGGCCATAAATTATGGGATCGGTTCTCTAATTATGTGAAAGAGATAATAGCCCCATGCTTAACATCTAGGTTTCAGCTTCCTAAAGTAGCTGCTGATTCAACATCTGCTGACCCTATTTACCGCACATCTATGTCCTTTAGAAGGTGGATATTCTGTTGGATAAGAAAACTAACTGCACACGCTACTGGGTCTCGTGCAAGCATCTTTAATGCTTGTCGTGGTATTGTGCGTCATGATATGCAAACAGCCATATATTTACTTCCGTACTTGGTTCTCAATGCTGTTTGTCACGGTACTGAGGAGGCACGTCAAGGCATAGCAGAAGAAATCCTGTCTGTTCTCGATGCAGCTGCATCAGAGAACAGTGGCGCTTCAGTTCATGGATTCAGTGGTGGTCAAAGTGAAGTTTGTATTCAAGCAGTGTTTACTCTTCTTGATAACCTAGGACAATGGGTGGATGATGTTGAACAGGAGCTTGCCCTTTCCAGTTCTCAACCATCAGTTTCGAAGCAACAAAAGTCAAAAGTCCAAAATTCAAATCCATTTACAGATCAGGTCCAACCCCTTTTACAGTGTAAATATGTTTCAGAGCTTCTGTCTGTGATTCCAAAGGTGACTCTTGCTAGGGCCTCCTTTAGGTGTCAGGCTCATGCAAGGTCCTTGATGTACTTTGAGTCTTATGTCAGGGAAAAGTCAGGTTCTTTCAACCCTGCTTCTGAGAGGAGTGGCATCTTTGAGGACCAAGATGTTTCACATCTAATGGAAATATATAGCTGTTTGGATGAGCCAGATGGACTATCCGGCTTATCTTGTTTAAGTAAATCATTGAGGTTACAAGATCAGCTGTTAATGAACAAAAAGGCTGGGAATTGGGCTGATGTTTTAACTTCTTGTGAACAAGCTTTGCAGATGGAGCCTACCTCATTTCAGAGGCATTCCGATGTCCTTAAATGTTTAGTAAATATGTGCCACCTTCAGGCCATGGTCACTCATGTTGATGGTTTAATTTCTAGGATTCCTCAGTACAAGAAAGCATGGTGCATGCAAGGTGTGCAGGCAGCCTGGAGGCTTGGCCGGTGGGATTTGATGGATGAGTACCTTGGTGGAGCTGAAGAAGATGGTTCGGTTTGTAGTAGCTCTGAAAGTAATACTTCATTTGACTTGAATGTTGCCATGATTCTCCAGGCAATGATGAAGAGGGACCGTTTCTCTGTCGCAGAAAAAATCGCTTTATCCAAGCAGTCACTAATTGCTCCCCTTGCTGCTGCAGGAATGGATTCTTACATGCGAGCCTACCCATTTGTTGTAAAACTGCACTTTCTACGGGAATTGGAGGATTTCCATTCTGTACTGGGTAATAATTCTTTCTTAGAGAAATCTTTTCACTTAGATGATCAAGCTTTCTCTAAATTACTGGACAACTGGGACAATCGACTCAGGTTTACACAGTCATCACTCTGGGCTAGAGAGCCTCTCCTGGCTTTCAGAAGACTGGTATTTGGTGCAAGCGGCCTTGGTGCTCAAGTTGGCAATTGCTGGCTTCAATATTCGAAACTGTGTCGCCTGGCTGGTCATTATGAAACCGCCAATAGAGCAATTTTGGAAGCTCAGGCCTCTGGTGCACCTAATGTCCACATGGAAAAGGCAAAACTTCTCTGGAGCACACGGCGGTCTGATGGTGCCATTGCAGTGTTGCAACAATCTCTCTTGAACATGCCTGTTGAGGTTTTAGGTTCTGCAACAATATCATCTATTACTAGCTTGTCCCTCTTACCACTTAATCCACAGCCAATTGTTTGTGAAAGTCAGGCCATGAATGAAAATAGAGACATTGCGAAGACCCTTCTTCTGTACTCTAGGTGGACTCATTACACTGGACAGAAACAGAAGGAAGATGTAATAAATCTTTATACCAGGGTGAGGGAATTGCAGCCCAAATGGGAGAAAGGGTACTTTTATATTGCTAAGTATTGTGATGAGGTACTTGTTGATGCCAGGAAACGACAGGTGGAGAATTTTGAACTTTGTCCTAGACCGATTCCTTCAGCAACTGTTGCTGCTGGCTCATCAAACCTGAATGGTGAGAGGCGGTGGTGGTCCTATGTTCCTGATGTACTGTTATTCTATGCAAAAGGACTTCACAGGGGACACAGGAATTTATTTCAGGCACTTCCAAGGTTATTAACCCTGTGGTTTGACTTTGGAAGCATGTATCAAAGAAGTGGTTCATCACACAAGGATTTAAAGACTGTACATGCGAAGGTAATGAGTATTATAAGAGGCTGTTTGAAGGATTTACCAACATACCATTGGTTGACAGTGCTACCTCAATTGGTTTCAAGGATTTGTCACCAGAATGAAGAGATTGTTCGACTGGTCAAACTTATCATTACCTCTGTTCTCCGCCAGTATCCACAACAGGGCCTGTGGATAATGGCTGCAGTTTCAAAATCCACTGTTCCTTCAAGGCGGGAAGCAGCAGCTGAAATCATACAAGCTGCTCGTAAAGGTTTCAGCCCAGGAAGTAAGGAGAACAGTTTATTTGTTCAATTTGCTACACTGATTGATCATCTGATCAAGTTATGCTTCCATGCTGGTCAGTCAAGATCAAAGACAATCAATCTCTCAACTGAATTCAGTTCTCTGAAGAGGATGATGCCCCTTGGAATTATAATGCCAATTCAACAATCTCTTACTGTTAATCTTCCAACATATGATGGGAATCTGGGCGATTCACGTATGTCTAATATCTTTTCGGCTACAGATCTTCCTACTATATTAGGCATTGCTGATGAGGCAGAAATTCTTTCTTCTCTTCAGCGGCCTAAGAAAATTGTTCTATTAGGCAGTGATGGTCTTGAGCGCCCATTTCTTTGCAAACCAAAGGATGACCTTCGCAAAGATGCTCGCATGATGGAGTTCACTGCAATGATCAACCGATTGCTATCCAAATATCCTGAGAGTCGTAGAAGGAAGCTCTATATTCGAACATTTGCTGTGATTCCTCTGACAGAAGACTGTGGCATGGTAGAGTGGGTGCCTCATACTAGTGGACTTCGGCAAATTCTTCAAAACATCTATATTACCTGTGGAAAGTTTGATAGGCAGAAAACTAATCCTCATATTAAACAAATTTATGATCAATGTCAAGGTAAAATGCCAGAGGATGAGATGCTAAAGAACAAAATCCTTCCAATGTTTCCTCCCGTTTTCCACAAATGGTTCCTGAAAACGTTTTCAGAGCCTGCTGCATGGTTCAGGGCCCGTGTTGCTTATGCTCACACGACTGCAGTTTGGTCTATGGTTGGGCATATTGTGGGACTGGGTGACCGGCATGGTGAAAATATTCTTTTTGATTCTACCACTGGCGATTGTGTTCACGTTGATTTCAGTTGCTTATTTGACAAAGGATTGCAATTGGAGAAGCCTGAGCTTGTTCCTTTTAGGCTAACTCAGAACGTGATCGATGGCTTAGGTATAACTGGATATGAGGGTATCTTCTTGAGGGTTTGTGAAATTACACTTTCAGTGCTGAGGTCGCACAGGGAGACTCTCATGAGTGTGCTTGAAACTTTCATCCACGATCCTCTTGTGGAATGGACAAAATCTCACAAGTCCAGTGGTGTAGAAGTGCAGAATCCACATGCACAGAGAGCAATTAGTAATATTGAGGCAAGGTTACAAGGAGTGGTTGTTGGGGTTGGAGCTGCGCCATCATTGCCACTTGCTGTAGAAGGTCAAGCTCGTAGACTAATTGCTGAAGCAGTCTCTCACAAGAATCTTGGAAGGATGTATATATGGTGGATGCCTTGGTTTTGA 6201 0.4122 YLKRDNEKVKKLLPTSLGLLSCIYGCKRSVSDSNINECKLFVNVKSGRTCSTVDCLLQGFFCSKCNGNFICNLDEKQAPIILRSGTHGVDPDFSFDHTFIQLQSLFFELLFDESSEDVQISCVRVIHQILAHGASDILLKTRLKWIKCLEFLLTCRSKELREAFCSQIRFFVDDLILSSIFAGDADKSKEEKFLDKIKHAMTIAGSPHILETLMECTAEIMVAVNIDSKLFLCSLILLVDQLDSTHMTVRMNASRLIHRSCYFHLKGGLELILSKDVRICSELYDYLSGRLASRPILVREFAEAVFGVETKELVKKMIPFVLPKLVVSQHNSQAVDTLYELAKCLNTDMVPLVVNWLPKVLAFSLHQSDDQQLITAVQFYHAQTGSDKKEIFAAALPALLDELVCFTDGGNSDEITRRLARVPHMIKDIAKVLTGAEDLPLFLRNHFVGLLNSIDRKLLHADDFMLQRQSLNRIELLIRMMGSHLSTYVPKLMVLLMHAIVKEPLQKEGLSVLHFFIKQLSKVSPASIKHIISQVFASLLPFLERDKENPSIHLDKVVTILEELVLENRVILKQHICEFPPLPSIPALTEVNKAIEDARGTMTLKDQLRDVVDGLNHENLNVRYMVMCELRKLLDSRWKDVTDLITAEAGSDLDVLSSLITSLLRGCAEESRTTVGKRLKLVCADCLGSLGAVDPAKVKGFSCQRFKIQCSDDDLIFELIHKHLARAFRSAPDTVIQDSAALAIQELLKFAGCEASLDESAPTTTSQTQKDEDNRKAVVSKIKSTNGSKGMNNRGHKLWDRFSNYVKEIIAPCLTSRFQLPKVAADSTSADPIYRTSMSFRRWIFCWIRKLTAHATGSRASIFNACRGIVRHDMQTAIYLLPYLVLNAVCHGTEEARQGIAEEILSVLDAAASENSGASVHGFSGGQSEVCIQAVFTLLDNLGQWVDDVEQELALSSSQPSVSKQQKSKVQNSNPFTDQVQPLLQCKYVSELLSVIPKVTLARASFRCQAHARSLMYFESYVREKSGSFNPASERSGIFEDQDVSHLMEIYSCLDEPDGLSGLSCLSKSLRLQDQLLMNKKAGNWADVLTSCEQALQMEPTSFQRHSDVLKCLVNMCHLQAMVTHVDGLISRIPQYKKAWCMQGVQAAWRLGRWDLMDEYLGGAEEDGSVCSSSESNTSFDLNVAMILQAMMKRDRFSVAEKIALSKQSLIAPLAAAGMDSYMRAYPFVVKLHFLRELEDFHSVLGNNSFLEKSFHLDDQAFSKLLDNWDNRLRFTQSSLWAREPLLAFRRLVFGASGLGAQVGNCWLQYSKLCRLAGHYETANRAILEAQASGAPNVHMEKAKLLWSTRRSDGAIAVLQQSLLNMPVEVLGSATISSITSLSLLPLNPQPIVCESQAMNENRDIAKTLLLYSRWTHYTGQKQKEDVINLYTRVRELQPKWEKGYFYIAKYCDEVLVDARKRQVENFELCPRPIPSATVAAGSSNLNGERRWWSYVPDVLLFYAKGLHRGHRNLFQALPRLLTLWFDFGSMYQRSGSSHKDLKTVHAKVMSIIRGCLKDLPTYHWLTVLPQLVSRICHQNEEIVRLVKLIITSVLRQYPQQGLWIMAAVSKSTVPSRREAAAEIIQAARKGFSPGSKENSLFVQFATLIDHLIKLCFHAGQSRSKTINLSTEFSSLKRMMPLGIIMPIQQSLTVNLPTYDGNLGDSRMSNIFSATDLPTILGIADEAEILSSLQRPKKIVLLGSDGLERPFLCKPKDDLRKDARMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTSGLRQILQNIYITCGKFDRQKTNPHIKQIYDQCQGKMPEDEMLKNKILPMFPPVFHKWFLKTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLQLEKPELVPFRLTQNVIDGLGITGYEGIFLRVCEITLSVLRSHRETLMSVLETFIHDPLVEWTKSHKSSGVEVQNPHAQRAISNIEARLQGVVVGVGAAPSLPLAVEGQARRLIAEAVSHKNLGRMYIWWMPWF* 2067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g0172 2066 ProSiteProfiles FAT domain profile. 1000 1612 IPR014009 -
Pvu7g0172 2066 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1723 2036 IPR000403 -
Pvu7g0172 2066 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 3 2062 - -
Pvu7g0172 2066 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 1889 1909 IPR018936 GO:0016301
Pvu7g0172 2066 Gene3D - 1684 1807 - -
Pvu7g0172 2066 Gene3D Tetratricopeptide repeat domain 998 1462 IPR011990 GO:0005515
Pvu7g0172 2066 SUPERFAMILY ARM repeat 616 1656 IPR016024 -
Pvu7g0172 2066 SMART UME_cls 439 545 IPR012993 GO:0004674
Pvu7g0172 2066 SMART FATC_2 2034 2066 IPR003152 GO:0005515
Pvu7g0172 2066 Pfam FAT domain 1145 1523 IPR003151 GO:0005515
Pvu7g0172 2066 PANTHER SERINE/THREONINE-PROTEIN KINASE ATR 3 2062 - -
Pvu7g0172 2066 Pfam Phosphatidylinositol 3- and 4-kinase 1750 1995 IPR000403 -
Pvu7g0172 2066 SMART pi3k_hr1_6 1750 2055 IPR000403 -
Pvu7g0172 2066 CDD PIKKc_ATR 1720 1996 - -
Pvu7g0172 2066 Pfam UME (NUC010) domain 442 542 IPR012993 GO:0004674
Pvu7g0172 2066 Gene3D - 1862 2023 IPR036940 GO:0016301
Pvu7g0172 2066 SUPERFAMILY Protein kinase-like (PK-like) 1713 1998 IPR011009 -
Pvu7g0172 2066 ProSiteProfiles FATC domain profile. 2034 2066 IPR003152 GO:0005515
Pvu7g0172 2066 Pfam FATC domain 2035 2066 IPR003152 GO:0005515
Pvu7g0172 2066 SUPERFAMILY ARM repeat 95 698 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g0172 Pvu-Chr7 1133907 1142193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g0172 K06640 - gmx:100804117 3769.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g0172 7 1133907 1142193 Pvu7g0172 7 1133907 1142193 ECH