Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2072 ATGACCTCCGTTTCTGACCCAGAGAAGCCGGTCACATCCCAAGAAGACGACGACGACGACGTTTCTCCAATCGAAGAGGTCCGTCTCACGGTCGCCAACACCGACGACCCGACCCGACCCGTATGGACCTTCCGGATGTGGCTCCTGGGTCTCCTCTCCTGCTCCCTCCTCTCCTTCCTCAACCAGTTCTTCGCCTACCGCACGGAGCCTCTCATCATCACTCAAATCACCATTCAAGTCGCCACACTCCCTATCGGCCACTTCATGGCCGCGGTTCTACCCGAAACCAAGTTCACTCTTCCCGGGTTCGGGTCCAAGTCATTCTCCCTCAACCCGGGCCCGTTTAACATGAAGGAGCACGTCCTCATTACCATATTCGCCAACGCCGGAAGCGCTTTCGGATCCGGGTCGCCCTACGCCGTTGGCATCGTTAACATTATCAAAGCCTTTTACGGACGCAGCATCTCCTTTTTTGCTTCTTGGCTTCTCATCATTACTACACAGGTGTTAGGATATGGATGGGCCGGATTACTGAGGAAATATGTGGTGGAACCGGCCCATATGTGGTGGCCCAGCACTCTCGTCCAAGTTTCACTTTTCCGAGCATTGCATGAGAAAGATGACCAACGACTTTCACGGGCGAAGTTTTTCTTTATTGCACTATTGTGCAGTTTTGTGTGGTACGTGATCCCTGGATACTTGTTCACAACGCTCACAAACATCTCATGGGTGTGTTGGATATTCTCCAAGTCAGTCACAGCTCAGCAGATAGGGTCAGGCATGAGGGGCCTTGGAGTTGGAGCCCTCACACTTGATTGGGCTGCTGTGGCATCATTCTTGTTCAGCCCTCTTATCTCACCCTTCTTTGCCATTGTCAATATTTTTGTGGGCTACGCATTAATAGTCTATGCTGTTATTCCTATAGCTTATTGGGGCCTCAATGTCTACAATGCCAAGAGGTTTCCCATTTTCTCCTCACACTTATTTACAGCACAAGGTCAAAGGTACAACATACCTGCTATTGTAGACGACCATTTCGAGTTAAGTGTTGCAGAGTATGAAAAGCAAGGGAGAATTCATCTCAGTGTGTTTTTCGCCCTCACTTATGGCTTCGGATTTGCCACCATAGCATCCACCCTCACACATGTGTTCTGCTTCTATGGAAGGGAGATTATGGAGCGCTATCGTGCTTCTTCCAAAGGGAAAGAAGATATTCACACAAAATTGATGAAAAGATACAAAGACATACCTTCCTGGTGGTTTTATTTATTGCTGGTTGTGACTCTTGTGGTTTCTCTCGCACTATGCATCTTTCTAAATGACCAGGTTCAAATGCCCTGGTGGGGACTTCTCTTTGCGGGAGCCCTAGCTTTCGGATTTACCCTCCCCATTAGCATCATCACTGCCACCACAAACCAGACACCAGGGTTGAATATCATCACTGAGTATGTCTTTGGTCTCATTTACCCGGGAAGACCAATTGCAAATGTCTGCTTCAAAACCTATGGTTACATTAGCATGGCCCAGGCTGTCTCTTTCCTCAGTGATTTCAAACTTGGGCACTACATGAAAATCCCTCCAAGATCAATGTTCTTGGTTCAGTTCATAGGTACAATGCTCGCTGGAACCATCAACATTGGGGTAGCATGGTGGTTGCTGAACTCCATCAAGAACATATGTCATGATGATCTCCTTCCTGCAGACAGTCCCTGGACATGCCCTGGTGACCGTGTATTCTTTGATGCATCAGTTATTTGGGGCCTTGTGGGGCCAAAGCGAATCTTTGGTTCTCAAGGAAACTACAGTGCAATGAATTGGTTTTTCCTTGGAGGGGCTTTAGGACCCGTAATTGTTTGGCTATTGCACAAAGCATTTCCAAAACAGTCATGGATTCCACTGATCAACCTCCCAATTCTCCTGGGAGCAACTGGAATGATGCCACCAGCAACACCATTGAACTACAATGCATGGATTTTGGTGGGGACAATTTTCAACTTCTTTATCTTCCGTTACAGAAAGAAATGGTGGCAGAGGTACAACTATGTTCTGTCAGCGGCACTTGACAGTGGGGTTGCTTTCATGACTGTCTTACTCTACTTCACATTGGGCTTGGAAAACAGGAGTCTAAATTGGTGGGGAAATGACGGTGAACATTGTCCACTCGCAGCTTGCCCAACTGCAAAAGGCATAATCGTTGATGGTTGCCCTGCAAACTAG 2217 0.4781 MTSVSDPEKPVTSQEDDDDDVSPIEEVRLTVANTDDPTRPVWTFRMWLLGLLSCSLLSFLNQFFAYRTEPLIITQITIQVATLPIGHFMAAVLPETKFTLPGFGSKSFSLNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFFASWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQVSLFRALHEKDDQRLSRAKFFFIALLCSFVWYVIPGYLFTTLTNISWVCWIFSKSVTAQQIGSGMRGLGVGALTLDWAAVASFLFSPLISPFFAIVNIFVGYALIVYAVIPIAYWGLNVYNAKRFPIFSSHLFTAQGQRYNIPAIVDDHFELSVAEYEKQGRIHLSVFFALTYGFGFATIASTLTHVFCFYGREIMERYRASSKGKEDIHTKLMKRYKDIPSWWFYLLLVVTLVVSLALCIFLNDQVQMPWWGLLFAGALAFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMAQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSIKNICHDDLLPADSPWTCPGDRVFFDASVIWGLVGPKRIFGSQGNYSAMNWFFLGGALGPVIVWLLHKAFPKQSWIPLINLPILLGATGMMPPATPLNYNAWILVGTIFNFFIFRYRKKWWQRYNYVLSAALDSGVAFMTVLLYFTLGLENRSLNWWGNDGEHCPLAACPTAKGIIVDGCPAN* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2072 738 MobiDBLite consensus disorder prediction 1 24 - -
Pvu6g2072 738 Pfam OPT oligopeptide transporter protein 42 701 IPR004813 GO:0035673
Pvu6g2072 738 PANTHER OLIGOPEPTIDE TRANSPORTER 4 14 737 - -
Pvu6g2072 738 PANTHER ISP4 LIKE PROTEIN 14 737 IPR004648 GO:0055085
Pvu6g2072 738 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 25 704 IPR004813 GO:0035673
Pvu6g2072 738 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 20 706 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2072 Pvu-Chr6 30468304 30474845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2072 12 738 Organic Solute Cotransporters AT5G64410 82.118 0.0 1271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2072 - - gmx:100811348 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2072 6 30468304 30474845 Pvu6g2072 6 30468304 30474845 ECH
Pvu6g2072 6 30468304 30474845 Pvu2g2219 2 37805252 37808327 PCT