Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2070 ATGGCTGCCGTGCTCCGCTCTCTCCGCCGCCGCGATGTCGCCTCCGCCACCTTCTCTGCTTACCGCTCGTTGACGGGAAGCACTAAGCCAGCATATGTAGCTCAAAAGTGGTCTTGTTTGGCTCGACCATTCAGTTCGAGACCTGCTGGAAATGATGTCATTGGTATTGATTTAGGTACAACCAATTCATGTGTTTCCGTCATGGAAGGAAAGAACCCCAAAGTTATCGAGAATTCGGAGGGTGCTAGAACAACACCATCTGTGGTTGCTTTTAACCAGAAAGGGGAGCTGCTTGTTGGTACCCCAGCCAAACGTCAAGCCGTAACTAACCCGACAAACACTGTCTTTGGTACCAAGCGTCTAATAGGTAGACGCTTTGATGATCCTCAAACACAAAAAGAGATGAAAATGGTTCCGTTCAAGATTGTTAAGGCTCCAAATGGTGATGCGTGGGTTGAGGCTAATGGACAACAGTATTCTCCTAGCCAAATTGGTGCCTTTGTTCTCACCAAGATGAAGGAAACTGCTGAAGCTTATCTTGGAAAGTCAGTTTCGAAGGCGGTAATTACTGTACCGGCCTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCAGGTCTTGATGTGCAGCGAATAATCAATGAACCCACTGCTGCTGCACTTTCTTACGGGATGAACAACAAGGAGGGTCTCATTGCTGTTTTTGACCTTGGAGGTGGAACATTTGATGTATCCATCTTAGAAATTTCGAATGGTGTGTTTGAGGTGAAAGCAACAAATGGTGACACTTTCTTGGGAGGAGAGGATTTTGACAATGCCTTGTTGGATTTTCTGGTGAACGAATTTAAAAGAACCGAGAGTATTGACCTTTCAAAGGACAGGCTTGCACTTCAGAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAGCTGTCTTCAACATCTCAAACTGAGATCAACCTGCCTTTCATTACTGCTGATGCTTCTGGTGCTAAGCATCTGAACATAACATTGACTAGATCTAAGTTTGAGGCTTTGGTAAATCACTTGATCGAAAGGACCAAGGCACCCTGCAAAAGCTGCTTGAAGGATGCTAACGTCTCTATCAAGGATGTTGATGAGGTTCTTCTTGTTGGAGGGATGACTAGGGTACCTAAAGTCCAAGAGGTGGTTTTAAATATCTTTGGAAAATCTCCCAGTAAAGGAGTAAACCCTGATGAGGCAGTTGCCATGGGGGCGGCAATCCAAGGTGGTATCCTTCGTGGAGATGTTAAAGAGCTACTACTCCTGGATGTAACACCGCTTTCTCTGGGTATTGAGACTTTGGGTGGTATCTTTACTAGGTTGATCAACCGCAACACTACTATTCCCACTAAGAAGAGTCAGGTCTTTTCAACTGCAGCTGACAATCAAACTCAGGTAGGTATCAAGGTGCTACAAGGTGAGCGGGAAATGGCTTCAGACAACAAAATGCTTGGAGAATTTGACCTTGTTGGTATCCCTCCTGCTCCCAGAGGTCTTCCTCAGATTGAGGTCACGTTTGACATTGATGCCAATGGAATTGTTACCGTCTCTGCCAAAGATAAGTCTACTGGGAAAGAACAACAAATCACCATTCGGTCATCTGGCGGACTCTCGGAAGATGAGATTGAAAAGATGGTGAAAGAAGCAGAGTTGCATGCCCAGAAAGACCAAGAGAGAAAAACTCTCATTGACATTAGAAATAGTGCTGACACAACTACTTATAGCATCGAAAAGAGTTTAGGTGAATACAGAGAGAAGATTCCCAGTGAAACGGCCAAAGAAATTGAGGATGCAGTTTCGGATTTGAGAAAGGCGATGTCAGGGGATAATGTTGATGAAATTAAATCAAAGCTTGACGCTGCAAACAAAGCTGTATCCAAAATTGGGGAGCACATGTCGGGTGGTTCTAGTGGTGGTTCCTCAGCCGGTGGTTCACAGGGTGGTGGTGACCAGGCTCCAGAGGCAGAATATGAGGAGGTCAAGAAGTGA 2028 0.4541 MAAVLRSLRRRDVASATFSAYRSLTGSTKPAYVAQKWSCLARPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPFKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKRTESIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFEALVNHLIERTKAPCKSCLKDANVSIKDVDEVLLVGGMTRVPKVQEVVLNIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKMLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSEDEIEKMVKEAELHAQKDQERKTLIDIRNSADTTTYSIEKSLGEYREKIPSETAKEIEDAVSDLRKAMSGDNVDEIKSKLDAANKAVSKIGEHMSGGSSGGSSAGGSQGGGDQAPEAEYEEVKK* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2070 675 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 427 583 IPR029047 -
Pvu6g2070 675 PANTHER HEAT SHOCK PROTEIN 70KDA 32 658 IPR013126 GO:0005524|GO:0140662
Pvu6g2070 675 SUPERFAMILY Actin-like ATPase domain 53 233 IPR043129 -
Pvu6g2070 675 MobiDBLite consensus disorder prediction 638 675 - -
Pvu6g2070 675 Pfam Hsp70 protein 53 645 IPR013126 GO:0005524|GO:0140662
Pvu6g2070 675 Gene3D - 229 409 - -
Pvu6g2070 675 ProSitePatterns Heat shock hsp70 proteins family signature 2. 239 252 IPR018181 -
Pvu6g2070 675 Gene3D - 550 647 IPR029048 -
Pvu6g2070 675 SUPERFAMILY Actin-like ATPase domain 234 425 IPR043129 -
Pvu6g2070 675 MobiDBLite consensus disorder prediction 646 660 - -
Pvu6g2070 675 Hamap Chaperone protein DnaK [dnaK]. 50 673 IPR012725 GO:0005524|GO:0006457|GO:0051082
Pvu6g2070 675 Gene3D Actin; Chain A, domain 4 272 359 - -
Pvu6g2070 675 PRINTS 70kDa heat shock protein signature 52 65 - -
Pvu6g2070 675 PRINTS 70kDa heat shock protein signature 80 92 - -
Pvu6g2070 675 PRINTS 70kDa heat shock protein signature 103 111 - -
Pvu6g2070 675 PRINTS 70kDa heat shock protein signature 187 207 - -
Pvu6g2070 675 PRINTS 70kDa heat shock protein signature 245 255 - -
Pvu6g2070 675 PRINTS 70kDa heat shock protein signature 377 393 - -
Pvu6g2070 675 PRINTS 70kDa heat shock protein signature 408 428 - -
Pvu6g2070 675 PRINTS 70kDa heat shock protein signature 431 450 - -
Pvu6g2070 675 PRINTS 70kDa heat shock protein signature 512 528 - -
Pvu6g2070 675 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 32 658 - -
Pvu6g2070 675 TIGRFAM prok_dnaK: chaperone protein DnaK 53 645 IPR012725 GO:0005524|GO:0006457|GO:0051082
Pvu6g2070 675 CDD HSPA9-like_NBD 50 425 - -
Pvu6g2070 675 ProSitePatterns Heat shock hsp70 proteins family signature 1. 56 63 IPR018181 -
Pvu6g2070 675 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 425 549 IPR029047 -
Pvu6g2070 675 Coils Coil 295 322 - -
Pvu6g2070 675 Gene3D - 54 422 - -
Pvu6g2070 675 ProSitePatterns Heat shock hsp70 proteins family signature 3. 380 394 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2070 Pvu-Chr6 30451542 30455196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2070 53 657 Miscellaneous Gene Families AT5G42020 50.872 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2070 K04043 - gmx:100804559 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2070 6 30451542 30455196 Pvu6g2070 6 30451542 30455196 ECH
Pvu2g2220 2 37816115 37819661 Pvu6g2070 6 30451542 30455196 PCT