Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2067 ATGGCTTCCGCCGTCCTTGCTAACCGGAACGAACCTAATTGGCCACAGCATAGAGGCGGTGGGGCTGGATTCATGGGAAAAGTACCTTTCTCTAACCCTAACCCTAATTCTAATCCTAAATTAGCAAATAGCAAAAGGACCCAATCGGCGTCCGACGATGCTTCTTCTATCAACCGGCGATCGAACGACGCGGGCGTAAGTCACTCTCAATACGTGTGCTTCAGCATCTCTTCGTGCACAAAGAAGGAGCTCAACGACATAAAAAATCGCCTCGTATCGGAGCTTGAACAGGTTCGCAAGTGCAGGAATCGAATCGAATCTGGCAAGTTACAGCCTGGGCAGAGCTCCAACGGCCACATGAAGAAACCGTCAAGCAAGAAGGTTTCCGGCAACAAGCGACCCTTACCGTTGAATTCCGTGAAGGAAATGAAACGGTCACATTCGGAAGTTGGGAACACGATGAAGAGTTGTTCGCAGATTTTGCAGAAGCTGATGAAACACAAACATGGGTGGATCTTCAATGTTCCTGTCGATGTTGTCGGAATGGGTCTCCACGATTACTATGATATAATTAAGCAACCTATGGATCTGGGTACTGTGAAGTCGAATCTCTCTAAGAGCGTGTACTCCACGCCTTCGGATTTCGCTGCTGATGTGAGGTTAACTTTCAAGAATGCTCTGACTTATAACCCTAAGGGTCATGACGTATACACCATGGCGGAGCAGCTTCTGATGAGGTTTGAGGAGCTGTATCGGCCGATGCGTGACAAATCTGATGGTTGGATCAGACAAGATCAAGATTACGATGAGGAATTGCAGGCCAGTTCTTGGAGCCACGTTGAGCCGCCGGAGAGGGTGAAGAAGAAGGAGAATCCGATCCCTCCTGCGAAATTGCAACAAGAGCCTCCGCAGCCCCCTGCAAGTTCATCAAACCCACCATTGCTGCAGTCTCCGGTGCGCACGCCATCTCCAATGCGAGCCCCTCCTGTGAAGCCTTTGAAACAACCGAAGCCGAAGGCTAAGGACCCCAACAAGAGGGAGATGAGTCTTGAAGAGAAACACAAGCTTGGATTAGGACTGCAGAGTTTGCCAGCAGAGAAAATGGAACAGGTGGTGCAGATCATAAGGAGGAGGAACGGGCATTTGAAGCAGGATGGGGATGAGATCGAGCTTGATATTGAGGCTGTTGACACAGAGACCCTTTGGGAACTTGATCGGTTGGTGACTAATTATAAGAAGATGGTTAGCAAGATTAAGAGGCAGGCATTGATGGGCAATATGAACAACAACAATGAGCAGTCTAGCAGAGGGAATGGGGAATTGGCTGCTAGCGAGAAGATTGATGGGAGTGCAGTTGAGATGAAGAAGTCAAAGGAAGTAGAAGCAGGGGAAGAGGATATTGACATTGGAGACGAGATGCCAATGAGTATGTTCCCCCCTGTGGAGATTGAGAAAGATAAAGATGTTGGTGGAGGGCGTGCCAGTAGTAGTTCTAGTAGCTCAGGCAGTTCAAGCAGTGACTCCTCATCGTCGAGTGATTCGGATTCAGGTAGTTCCTCGGGGAGCGATTCTGAAGCAGACAATGGGCATTTGTAG 1596 0.49 MASAVLANRNEPNWPQHRGGGAGFMGKVPFSNPNPNSNPKLANSKRTQSASDDASSINRRSNDAGVSHSQYVCFSISSCTKKELNDIKNRLVSELEQVRKCRNRIESGKLQPGQSSNGHMKKPSSKKVSGNKRPLPLNSVKEMKRSHSEVGNTMKSCSQILQKLMKHKHGWIFNVPVDVVGMGLHDYYDIIKQPMDLGTVKSNLSKSVYSTPSDFAADVRLTFKNALTYNPKGHDVYTMAEQLLMRFEELYRPMRDKSDGWIRQDQDYDEELQASSWSHVEPPERVKKKENPIPPAKLQQEPPQPPASSSNPPLLQSPVRTPSPMRAPPVKPLKQPKPKAKDPNKREMSLEEKHKLGLGLQSLPAEKMEQVVQIIRRRNGHLKQDGDEIELDIEAVDTETLWELDRLVTNYKKMVSKIKRQALMGNMNNNNEQSSRGNGELAASEKIDGSAVEMKKSKEVEAGEEDIDIGDEMPMSMFPPVEIEKDKDVGGGRASSSSSSSGSSSSDSSSSSDSDSGSSSGSDSEADNGHL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2067 531 MobiDBLite consensus disorder prediction 30 62 - -
Pvu6g2067 531 MobiDBLite consensus disorder prediction 1 62 - -
Pvu6g2067 531 Pfam Bromodomain 157 241 IPR001487 GO:0005515
Pvu6g2067 531 Gene3D - 143 265 IPR036427 GO:0005515
Pvu6g2067 531 PRINTS Bromodomain signature 168 181 IPR001487 GO:0005515
Pvu6g2067 531 PRINTS Bromodomain signature 184 200 IPR001487 GO:0005515
Pvu6g2067 531 PRINTS Bromodomain signature 200 218 IPR001487 GO:0005515
Pvu6g2067 531 PRINTS Bromodomain signature 218 237 IPR001487 GO:0005515
Pvu6g2067 531 MobiDBLite consensus disorder prediction 272 349 - -
Pvu6g2067 531 SUPERFAMILY Bromodomain 148 258 IPR036427 GO:0005515
Pvu6g2067 531 MobiDBLite consensus disorder prediction 108 124 - -
Pvu6g2067 531 ProSiteProfiles Bromodomain profile. 165 237 IPR001487 GO:0005515
Pvu6g2067 531 Coils Coil 84 104 - -
Pvu6g2067 531 MobiDBLite consensus disorder prediction 335 349 - -
Pvu6g2067 531 MobiDBLite consensus disorder prediction 426 531 - -
Pvu6g2067 531 ProSiteProfiles NET domain profile. 338 419 IPR027353 -
Pvu6g2067 531 PANTHER OSJNBA0053K19.4 PROTEIN 40 527 - -
Pvu6g2067 531 MobiDBLite consensus disorder prediction 426 440 - -
Pvu6g2067 531 Gene3D - 341 417 IPR038336 -
Pvu6g2067 531 PANTHER TRANSCRIPTION FACTOR GTE2 40 527 - -
Pvu6g2067 531 MobiDBLite consensus disorder prediction 449 463 - -
Pvu6g2067 531 MobiDBLite consensus disorder prediction 104 136 - -
Pvu6g2067 531 MobiDBLite consensus disorder prediction 296 334 - -
Pvu6g2067 531 Pfam Bromodomain extra-terminal - transcription regulation 347 409 IPR027353 -
Pvu6g2067 531 SMART bromo_6 146 256 IPR001487 GO:0005515
Pvu6g2067 531 CDD Bromo_plant1 153 251 IPR037377 -
Pvu6g2067 531 MobiDBLite consensus disorder prediction 492 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2067 Pvu-Chr6 30438951 30440756 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2067 - - gmx:100819363 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2067 6 30438951 30440756 Pvu6g2067 6 30438951 30440756 ECH