Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2063 ATGGGGAAAAAACGTGTAATGTTGCCGGCTAAGGACGTTGACTTGTCCTCAATTAAGTACGAACGTGAAGTGGTTCAAGCTCCGCATTTGACTGGATTTGTGTTTAGATTATTTGTGAGGATACTTGAACTTCCGCTGATCGGCCCTATGATCATTAATGTTTTGAAGAAGCAAAATAAAATTGACAAGATATTGCAGCACACTGTGATACCTGAGGAACCCATGTTTAAGCCTGAATATCCACCTCAAGAAACGGAACCTGGTGTTGTTGTCCTTGAAGAAGATGGGAGACCTGAAGATCGAGTTGTGTCTGCCTTGAAGTGTCTTCCACATTATGATGCTGCTGAATTTTTGGAAAATTCACATGCATCCTTTCGGTACTGGAAAATACGCGACTATGCTCATGCTTATCGATCTAGAAAAGTAACCCCATCCTTGGTTGCCGAGCACATAATCTCCATTATAGAGGAGAATGGAGGAAATAAACCTCCTATACCACTATTGATATCCTTTGTAGCTGAGGAAGTCCGAGAGCAGGCGGCAGCATCTACTCAGAGGTTTGAAGCAGGAAATCCATTGTCGATATTGGATGGAATTTTTATGGCCATCAAAGATGACATCGATTGTTATCCTCATCCATCTAAGGGAGCATCGACATGGATGCATGAGGTACGTACTGTAAAGAAGGATGCAGTCTGTGTTTCAAGACTGCGAAGCTGCGGTGTCATATTCGTAGGGAAAGCAAATATGCATGAGTTAGGAATGGGTACAACAGGAAATAATCCTAATTATGGAACTGCAAGAAATCCTCATGCACCTGATCGGTATACTGGTGGATCTTCTTCAGGTCCAGCTGCAATTGTTGCTTCTGGAATATGTTCTGCTGCATTGGGAACTGATGGTGGAGGTTCAATCCGTATTCCTTCTTCCCTTTGTGGTGTGGTGGGATTGAAGACGACATATGGGCGGACAAGCATGGAGGGGTCATTATGCGATTCTGGGACTGTGGAAATTATTGGTCCTATTGCTTCATCAGTGGAGGACGTCATGCTAGTGTATGCGGCAATGTTGGGAGCGTCGCCTGCAAATAGAATCAGTTTAAGACCGTCACCACCTTGTTTGCCAACTCTGTCATCCAATGACCATTCAAATGCCTTGGGATTTTTAAGAATAGGAAAGTACACTCCGTGGTTTAATGACGTGCATTCAACTGAAATATCCGATAAATGCGAGGATGCACTTAATCTACTGTCAAAGGAGCATGGTTGTGAAATTATAGAAATTGTTATACCAGAGCTTCTTGAGATGCGAACTGCGCATGTCGTTTCTATTGGCTCTGAATGCTTATGTTCGCTGAATCCTGATTGTGAAGACGGGAAAGGTGTAAAATTGGCATATGATACTCGGACAAGTTTGGCTCTTTTTCGGTCATTTACAGCAGCAGATTATGTTGCAGCCCAATGTATCAGACGAAGGAATATGTATTACCACATGGAGATTTTCAAGAAAGTGGATGTCATAGTAACTCCGACCACTGGCATGACAGCACCCAGAATACCTCCTAGTGCTCTTAAAAGTGGTGAAACAGATATGCAGACTACAGCTAACCTTATGCAGTTCGTTGTTCCTGCAAATCTTCTGGGACTGCCTGCCATTTCTGTCCCGGTTGGTTACGATAAAGAGGGACTTCCAATAGGTTTGCAAATAATGGGTGGACCATGGGCGGAAGCTACTATTCTGCGGGTAGCCTCTGAAGTTGAGAAACTCTGCGGCGAGACAAAGAAAAAGCCCGCGTCATATTATGATGTTCTGAAGGCCAACTGA 1824 0.437 MGKKRVMLPAKDVDLSSIKYEREVVQAPHLTGFVFRLFVRILELPLIGPMIINVLKKQNKIDKILQHTVIPEEPMFKPEYPPQETEPGVVVLEEDGRPEDRVVSALKCLPHYDAAEFLENSHASFRYWKIRDYAHAYRSRKVTPSLVAEHIISIIEENGGNKPPIPLLISFVAEEVREQAAASTQRFEAGNPLSILDGIFMAIKDDIDCYPHPSKGASTWMHEVRTVKKDAVCVSRLRSCGVIFVGKANMHELGMGTTGNNPNYGTARNPHAPDRYTGGSSSGPAAIVASGICSAALGTDGGGSIRIPSSLCGVVGLKTTYGRTSMEGSLCDSGTVEIIGPIASSVEDVMLVYAAMLGASPANRISLRPSPPCLPTLSSNDHSNALGFLRIGKYTPWFNDVHSTEISDKCEDALNLLSKEHGCEIIEIVIPELLEMRTAHVVSIGSECLCSLNPDCEDGKGVKLAYDTRTSLALFRSFTAADYVAAQCIRRRNMYYHMEIFKKVDVIVTPTTGMTAPRIPPSALKSGETDMQTTANLMQFVVPANLLGLPAISVPVGYDKEGLPIGLQIMGGPWAEATILRVASEVEKLCGETKKKPASYYDVLKAN* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2063 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
Pvu6g2063 607 SUPERFAMILY Amidase signature (AS) enzymes 106 590 IPR036928 -
Pvu6g2063 607 PANTHER GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A-RELATED 4 606 - -
Pvu6g2063 607 Pfam Amidase 169 580 IPR023631 -
Pvu6g2063 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Pvu6g2063 607 PANTHER TRANSAMIDASE 4 606 IPR000120 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2063 Pvu-Chr6 30399327 30407643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g2063 1 607 Acyl Lipid Metabolism Gene Families AT5G64440 67.763 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2063 - - gmx:100778732 1119.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2063 6 30399327 30407643 Pvu6g2063 6 30399327 30407643 ECH