Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2045 ATGGGGTTGTTCAAGATTTCATTTTGTATACTGTGTGTGTTAGGGTTGGTGATTGTGGGCGATGTAGTTCATGCTCAAGATTCAATAGCTGACTACGTGAACGAACATAACGCTGCAAGGTCACAGGTTGGTGTTTCAAATATTGTTTGGGATAATACAGTTGCTGCTTTCGCACAAAACTATGCAAATCAACGCAGAGGTGACTGCAGACTGATCCACTCTGGCGATGCAGTGAAGTTGTGGGTGGCTGAGAAACCATTCTATAACTACAATTCCAACTCTTGTGCTGCCGGCAAACAGTGCGGGCACTACACTCAGGTTGTTTGGAGGAACTCTGTACGCGTTGGATGTGCGAAAGTAAGATGCAACAATGGAGGCACCTTCATCACCTGCAACTATTCTCCTCCTGGCAACTATGTTGGTCAAAGACCCTACTAA 438 0.4543 MGLFKISFCILCVLGLVIVGDVVHAQDSIADYVNEHNAARSQVGVSNIVWDNTVAAFAQNYANQRRGDCRLIHSGDAVKLWVAEKPFYNYNSNSCAAGKQCGHYTQVVWRNSVRVGCAKVRCNNGGTFITCNYSPPGNYVGQRPY* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2045 145 ProSitePatterns CRISP family signature 2. 128 139 IPR018244 GO:0005576
Pvu6g2045 145 Pfam Cysteine-rich secretory protein family 34 65 IPR014044 -
Pvu6g2045 145 Pfam Cysteine-rich secretory protein family 76 133 IPR014044 -
Pvu6g2045 145 Gene3D CAP 75 145 IPR035940 -
Pvu6g2045 145 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 1 145 - -
Pvu6g2045 145 ProSitePatterns CRISP family signature 1. 102 112 IPR018244 GO:0005576
Pvu6g2045 145 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 1 145 IPR001283 -
Pvu6g2045 145 SMART SCP_3 27 141 IPR014044 -
Pvu6g2045 145 CDD CAP_PR-1 30 145 - -
Pvu6g2045 145 SUPERFAMILY PR-1-like 6 145 IPR035940 -
Pvu6g2045 145 Gene3D CAP 22 74 IPR035940 -
Pvu6g2045 145 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Pvu6g2045 145 PRINTS Allergen V5/Tpx-1 family signature 101 117 IPR001283 -
Pvu6g2045 145 PRINTS Allergen V5/Tpx-1 family signature 128 141 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2045 Pvu-Chr6 30279443 30279923 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2045 K13449 - gmx:100806194 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2045 6 30279443 30279923 Pvu6g2045 6 30279443 30279923 ECH