Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g2043 ATGAAAATGGGGTTGTGCAAGCTTTCCTTTTTTGCATTGAGTGTGTTAGGGTTGGTGATTGTGGGCGATGTAGTTTATGCTCAAGATTCAATAGCTGACTACGTGAACGAACATAACGCTGCAAGGTCACAGGTTGGTGTTCCAAACATTGTTTGGGATAATACAGTTGCTTCTTTCGCACAAAACTATGCAAATCAACGCCAAGGTGACTGCAATCTGATCCACTCTGGTGGTGGAGGAAAATACGGGGAGAATCTTGCAAAAAGCAGTGGTGACCTAAGTGGGAAAGATGCAGTGAAGTTGTGGGTGGATGAGAAACAATACTATGACTACAATTCCAACTCTTGTGCTGCCGGCCAACAGTGCGGACACTACACTCAGGTTGTTTGGAGGAACTCTGTACGCGTTGGATGTGCCAAAGTAAGATGCAGCAATGGAGGCACCTTCATCACCTGCAACTATTCTCCTCCTGGCAACTATGTTGGTCAAAAACCCTACTAA 501 0.4531 MKMGLCKLSFFALSVLGLVIVGDVVYAQDSIADYVNEHNAARSQVGVPNIVWDNTVASFAQNYANQRQGDCNLIHSGGGGKYGENLAKSSGDLSGKDAVKLWVDEKQYYDYNSNSCAAGQQCGHYTQVVWRNSVRVGCAKVRCSNGGTFITCNYSPPGNYVGQKPY* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g2043 166 PRINTS Allergen V5/Tpx-1 family signature 50 68 IPR001283 -
Pvu6g2043 166 PRINTS Allergen V5/Tpx-1 family signature 98 111 IPR001283 -
Pvu6g2043 166 PRINTS Allergen V5/Tpx-1 family signature 122 138 IPR001283 -
Pvu6g2043 166 PRINTS Allergen V5/Tpx-1 family signature 149 162 IPR001283 -
Pvu6g2043 166 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 3 166 - -
Pvu6g2043 166 Pfam Cysteine-rich secretory protein family 36 154 IPR014044 -
Pvu6g2043 166 ProSitePatterns CRISP family signature 1. 123 133 IPR018244 GO:0005576
Pvu6g2043 166 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 3 166 IPR001283 -
Pvu6g2043 166 CDD CAP_PR-1 32 166 - -
Pvu6g2043 166 SMART SCP_3 29 162 IPR014044 -
Pvu6g2043 166 PRINTS Venom allergen 5 signature 50 68 IPR002413 -
Pvu6g2043 166 PRINTS Venom allergen 5 signature 96 111 IPR002413 -
Pvu6g2043 166 PRINTS Venom allergen 5 signature 121 140 IPR002413 -
Pvu6g2043 166 ProSitePatterns CRISP family signature 2. 149 160 IPR018244 GO:0005576
Pvu6g2043 166 SUPERFAMILY PR-1-like 26 166 IPR035940 -
Pvu6g2043 166 Gene3D CAP 30 166 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g2043 Pvu-Chr6 30268320 30269086 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g2043 K13449 - gmx:100806194 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2043 6 30268320 30269086 Pvu6g2043 6 30268320 30269086 ECH