Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1996 ATGGCAATAGGTGAAGAAAGGCGAGAATCACAATCAGAATCAGAAGGAAAAGTTTGGAATTTGTTGAAGCTTCCCTTTCGCCATTCAACTGTTTCAACCTCCAATTCTGTTTCTTCCCTTGCCAGATCGCTCCTTCCCACACGACGTCGTCTCAAGCTCGATCCTTCCAGCAAGCTCTACTTCCCTTATGAACCGGGCAAGCAGGTTAAGAGTGCCATCAGGATTAAAAACACCAGCAAATCCAATGTAGCTTTCAAGTTTCAAACAAATGCACCCAAGAGCTGTTTCATGCGCCCTCCAGGGGGTGTACTTACACCTGGCGAGAGTATAATTGCGATTGTGTTCAAGTTTGTAGAGCATCCACTCAATAATGAAAAGCCAGAAAAAACTGGATTCAAATTTAAAATCATGAGCATGAAGGTCAAAGGATCAATTGAATATGTCCCTGAAATGTTTGGTGAGCTGAAGGATCAAGTAACAGTGGAACAGATTTTGCAGGTTGTTTTTCTGGACCCAGAGCGTAATAGTCCTGCTTTGGAAAAACTGAGGCTTCAGCTAGCTGAGGCTAATGCTGCAGTTGAGGCACGTAAGAGAGCCCCAGAAGATGAAGATCCTGAGATTTTGAGAGAAGGGCTCGTCATAGATGAATGGAAAGAGAGGAGGGAAAGATATCTGGCAAAGCAGCAGGGTGAAATGGTAATGGACTCTATATAG 714 0.4398 MAIGEERRESQSESEGKVWNLLKLPFRHSTVSTSNSVSSLARSLLPTRRRLKLDPSSKLYFPYEPGKQVKSAIRIKNTSKSNVAFKFQTNAPKSCFMRPPGGVLTPGESIIAIVFKFVEHPLNNEKPEKTGFKFKIMSMKVKGSIEYVPEMFGELKDQVTVEQILQVVFLDPERNSPALEKLRLQLAEANAAVEARKRAPEDEDPEILREGLVIDEWKERRERYLAKQQGEMVMDSI* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1996 237 SUPERFAMILY PapD-like 40 178 IPR008962 -
Pvu6g1996 237 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 27 229 IPR016763 GO:0005789
Pvu6g1996 237 Pfam MSP (Major sperm protein) domain 51 159 IPR000535 -
Pvu6g1996 237 ProSiteProfiles Major sperm protein (MSP) domain profile. 50 170 IPR000535 -
Pvu6g1996 237 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 27 229 - -
Pvu6g1996 237 Coils Coil 179 199 - -
Pvu6g1996 237 Gene3D Immunoglobulins 46 174 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1996 Pvu-Chr6 29994535 29997338 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1996 - - gmx:100786563 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1996 6 29994535 29997338 Pvu6g1996 6 29994535 29997338 ECH
Pvu2g2277 2 38481612 38482567 Pvu6g1996 6 29994535 29997338 PCT