Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1982 ATGCGTTCTCTGAAAGTTCTGCTGCTCTGGTTCGCCTTCATGTTCGCGGCCTTGGGAGTGAAAGTGTCTCTTCCGATCGCAGCCACACACCTCCCTCTCCTCTGGACCTTCTTCCTCCTCTGCTTCAAGCCTCCTTACCTCTTCCTCCTTCTCAACACCATCATCATCTCCATCGTCGCATCCTCCAAATTCCACTCCTCCAATCCTCAACCAAATTCAAATCCTCCTCCTCCTTCACCCGTTCTCCAAGAACAAGAAGCGGAAAAGAAAGTAATCCACCAAGGAATCGAAGTCAAGAGAACAGACTCAACGGAGATTCCATCGCCGTCGGAGAAGCCTCTCGTGTCCGCTAGGTTCATTCACCGGAAATTCACTAAATCCACTTCTGAAGGTGGGAGAGCGTTGAGAGTGGTGGCCAAGGCGAAACGGCACGAAACGTTGGAGACCACGTGGAAGACCATAACGGAGGGTCGATCCATGCCGTTGAGCAGACACATGAAGAAGTGTGACACGTGGCAGAGCCGCGGCAACTTCGCCCAATCGCAGGAAAACCAGTCCGACGAGACCTTCTTCGACGTTTCCGCCGCCGGGAGGCTGCGGAAAGAGCCGTCGCTGAGTCAAGAGGATTTGAATCGGCGCGTGGAAGCGTTCATACGGAAGTTCAACGACGAGATGAGGTTGCAGAGGCAACAATCCTTAGAACAGTACATGCAGATGATTAACCGCGGTGCCGCTTAA 738 0.5312 MRSLKVLLLWFAFMFAALGVKVSLPIAATHLPLLWTFFLLCFKPPYLFLLLNTIIISIVASSKFHSSNPQPNSNPPPPSPVLQEQEAEKKVIHQGIEVKRTDSTEIPSPSEKPLVSARFIHRKFTKSTSEGGRALRVVAKAKRHETLETTWKTITEGRSMPLSRHMKKCDTWQSRGNFAQSQENQSDETFFDVSAAGRLRKEPSLSQEDLNRRVEAFIRKFNDEMRLQRQQSLEQYMQMINRGAA* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1982 245 Pfam Domain of unknown function (DUF4408) 32 64 IPR025520 -
Pvu6g1982 245 Pfam Cotton fibre expressed protein 207 242 IPR008480 -
Pvu6g1982 245 PANTHER COTTON FIBER EXPRESSED PROTEIN 1-LIKE PROTEIN 84 244 - -
Pvu6g1982 245 PANTHER COTTON FIBER EXPRESSED PROTEIN 1-LIKE PROTEIN 3 78 - -
Pvu6g1982 245 MobiDBLite consensus disorder prediction 66 86 - -
Pvu6g1982 245 PANTHER COTTON FIBER (DUF761) 84 244 - -
Pvu6g1982 245 PANTHER COTTON FIBER (DUF761) 3 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1982 Pvu-Chr6 29879779 29881123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1982 - - vra:106775373 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1982 6 29879779 29881123 Pvu6g1982 6 29879779 29881123 ECH