Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1974 ATGTCTTCATATGTTTCAAGCTTTGGTACAAAAATCCCACGTATGGGGAAGGGGTACGATGATGTCTTCACAGTGACCAAGACCAACCATGCAGTGAAGCAACCTGGTTCAAGCTCCAACTATAAAGTGCCCTGCAACCTCTCAAAGCAGCACATTGGTTTTGTGTCAAAATTCGACCAAATTTGTTCTTTTCCTGTGATGGAGGAGGAGCAGAAAAGGTTGGATGTTTTGCCTGAATTATCAGAGGAATATTCCAAGGAATTGGAGGTGGCTGTTAAAGCAGTGCAGATGGCGTGTTCCCTCTGCCAGAGAGTGCAGGACACTATAATTTCCAGCACTGGGTCTGGGACCAATCATCGCCAGGTGCAGTCCAAGGATGATAATTCTCCGGTTACAGTAGCAGATTGGAGTGTTCAAGCAATTGTCAGCTGGATGCTGTCAGAATGTTTAGGGAGTCAAAATGTCTCAATTGTTGCTGAAGAAGATGTTCAAAGCCTCTCCAAAGCTAATGCATCTGAACTGTTAGAAGCTGTGGTTGAAACTGTGAATCAATGTCTAGCTGAAGCACCTCGATTTGGAGTTGAGAAGCCAAAATGTGGTCTTTCAAATTCAGATGTTCTTGAAATCATTGGTCGCTGTAACTCAACCGGGGGTCCCACCGGAAGATTTTGGGTACTGGATCCTGTTGATGGAACACTGGGGTTTGTACGTGGAGATCAATATGCTGTAGCTCTAGCACTCATAGAGGATGGAGAAGTGAAGCTTGGTGTTCTTGGATGTCCTAACTACCCAATGAGGAAGGAATGGTTAAGTTATCATCACCGCTATCATAGGATTATATCCAAGTTGACTCCATCAACTTCTGAAACTTGGAACAAAGGTTGTGTACTATATGCTAAAAGGGGTAGTGGGAAGGCTTGGATGCAACCTCTGCTCCATGTCAATAAGATGTTTGTGTGGCCAAACCATGCAAAACAAGTTTCTGTCTCTCCCATTGACAATCCTGCACTTGCCACCTTTTGTGAACCAGTTGAGAAGGCCAATTCAAGCCATTCTTTTACTGCAGGACTGGCTCACACTATTGGTCTCAGGAAACAACCGTTGAGGGTATACAGCATGGTAAAGTATGCAGCAATAGCTCGTGGAGATGCTGAGGTTTTCATGAAGTTTGCAAGGGCTGGTTACAAGGAGAAAATATGGGATCATGCTGCAGGTGTTATCATCATAGAGGAAGCTGGTGGGATGGTAACAGATGCAGGAGGACTTCCCCTAGACTTCTCAAAAGGGTTATATTTAGAAGGCCTTGATCGTGGCATAGTTGCCTGCTCTGGAGCCACACTTCATGCAAAGATCATTGAAGCAGTTGATGCTAGCTGGGGCTCTTCTAGCCTTTGA 1395 0.4495 MSSYVSSFGTKIPRMGKGYDDVFTVTKTNHAVKQPGSSSNYKVPCNLSKQHIGFVSKFDQICSFPVMEEEQKRLDVLPELSEEYSKELEVAVKAVQMACSLCQRVQDTIISSTGSGTNHRQVQSKDDNSPVTVADWSVQAIVSWMLSECLGSQNVSIVAEEDVQSLSKANASELLEAVVETVNQCLAEAPRFGVEKPKCGLSNSDVLEIIGRCNSTGGPTGRFWVLDPVDGTLGFVRGDQYAVALALIEDGEVKLGVLGCPNYPMRKEWLSYHHRYHRIISKLTPSTSETWNKGCVLYAKRGSGKAWMQPLLHVNKMFVWPNHAKQVSVSPIDNPALATFCEPVEKANSSHSFTAGLAHTIGLRKQPLRVYSMVKYAAIARGDAEVFMKFARAGYKEKIWDHAAGVIIIEEAGGMVTDAGGLPLDFSKGLYLEGLDRGIVACSGATLHAKIIEAVDASWGSSSL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1974 464 Gene3D - 82 317 - -
Pvu6g1974 464 SUPERFAMILY Carbohydrate phosphatase 84 457 - -
Pvu6g1974 464 CDD PAP_phosphatase 87 455 - -
Pvu6g1974 464 Pfam Inositol monophosphatase family 127 458 IPR000760 GO:0046855
Pvu6g1974 464 PRINTS Inositol monophosphatase superfamily signature 224 240 IPR000760 GO:0046855
Pvu6g1974 464 PRINTS Inositol monophosphatase superfamily signature 397 421 IPR000760 GO:0046855
Pvu6g1974 464 ProSitePatterns Inositol monophosphatase family signature 1. 224 237 IPR020583 -
Pvu6g1974 464 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 84 463 IPR006239 GO:0006790|GO:0008441
Pvu6g1974 464 PANTHER PAP-SPECIFIC PHOSPHATASE HAL2-LIKE 60 464 - -
Pvu6g1974 464 PANTHER PHOSPHATASE 60 464 - -
Pvu6g1974 464 ProSitePatterns Inositol monophosphatase family signature 2. 400 414 IPR020550 GO:0046854
Pvu6g1974 464 Gene3D - 328 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1974 Pvu-Chr6 29833093 29837498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1974 K01082 - gmx:100776247 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1974 6 29833093 29837498 Pvu6g1974 6 29833093 29837498 ECH
Pvu2g2303 2 38807528 38808905 Pvu6g1974 6 29833093 29837498 PCT