Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1920 ATGAGTGGTGGGTCATTGGGTATTCGTTCTGGGAGTTATGGCTCTTTGGAGAAGCAGCAACAGCTGCTGCAGCACAACGGTGTGTCGCCAATTCAATCAGCACGAAAGCCTTCCAAGATGCTGAAGGACAAAGACAGGTTCTTCCATTGGATCTTCAAGTTTGCAGGCCGAAAGAAGGTGGGAATGCTCTTTCTCTTTGCCATCTCCGCTGCTGTTTTCATCTGGGTTTTGTACCTTGGAAAAGGTGAAGATTCACAGGAGGGAAACGGTGTGCATAATAACATTAGTCTTAATGAAAGTATGTCTATAGTTGATTCTCCATCTGTGATCTCTACTTCAAACATCTTGGGCTTCTCCACAATTTTAGTTCTTCCTCCTCCTCCTCCTCCTCCCCCAAGCTATTTTCTGGGTTACTCTCTTCCTCCTGGTCATCCGTGTAATAGTTTCACACTTCCTCCTCCACCGGCAGACAAAAAGCGAACCGGGCCACGGCCCTGCCCGGTATGTTACCTTCCTGTGGTGGAAGCCATTGCACTTATGCCAAAGTTGCCGTCTCCTTCTCCAGTACTTAAGAACTTAGCATTTATCTATGAGGAAACTCTTAGCAGGGATGGTGAATTTGGTGGTTCGGACTTTGGTGGATACCCTACTTTGAGGCAGAGAAATGAATCTTTTGATATACGAGAGTCAATGAGTGTGCACTGTGGATTTGTTAGAGGAACTAAACCTGGCCGCAACACAGGATTTGACATGGATGAAGATGACCTCCTCGAAATGGAGCAGTGTCATGGCATAGTTGTTGCATCAGCCATATTTGGAAATTTTGATGAAATAAATGAGCCGAAAAATATAAGCGATTATTCAAAGGAGACAGTGTGCTTTCTTATGTTTGTTGATGACGAAACAGAAAAATATTTGAGGAGTTCTGGCAGGCTGGGAATTAGCAAGAAGATTGGTTTGTGGAGAATTATTGTTGCTCATAATCTTCCTTATACAGATGCAAGACGCTCGGGGAAGATTCCAAAGCTTCTGTTGCATAGAATGGTTCCAAATGCCCGCTATTCCATATGGCTTGATGGAAAGCTTGAGCTTGTTGTTGATCCATATCAAATCCTTGAAAGGTTTTTGTGGAGGAAGAATGCAACTTTTGCAATTTCTAAACATTATAAACGCTTCGATGTATTTGTTGAGGCTGAGGCAAATAAAGCCGCTGGAAAGTATGATAATGCCTCTATTGACTTTCAGATCGAGTTTTACAAGAATGAGGGACTGACTCCATATACAGAGGCCAAACTTCCTCTTATAAGTGATGTTCCTGAAGGATGTGTAATAGTAAGAGAGCATGTTCCCATTAGCAACCTTTTTACTTGTCTTTGGTTCAATGAAGTGGACCGGTTCACTTCTAGAGACCAGATTAGTTTCTCAATTGTCAGGGATAAACTTTTGTCCAGGGTGGATTTTCATTTTCTCATGTTCTTGGATTGTGAAAGACGCAACTTTGTAGTTCAGAAATACCATAGGGATATATTGGAACGTCTGGCTGCTCCGGTGGCAGTTGGTCTCAGTCCTCCACCTTCTCCATTGCATCGTGTGCGTGAAACATCACCGGAAAAGGTTGGTAGGAGAGTCCCCGGAAAGCACGGAAGAGAGCGGCGGCCGAGTTCTAGGCGGCACCGGAAAGTTGTGGCCGGAGGCAGGGACACAAATATAGAAGCAAATTATACAGTTTTGAAAGTGTGA 1740 0.4397 MSGGSLGIRSGSYGSLEKQQQLLQHNGVSPIQSARKPSKMLKDKDRFFHWIFKFAGRKKVGMLFLFAISAAVFIWVLYLGKGEDSQEGNGVHNNISLNESMSIVDSPSVISTSNILGFSTILVLPPPPPPPPSYFLGYSLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVVEAIALMPKLPSPSPVLKNLAFIYEETLSRDGEFGGSDFGGYPTLRQRNESFDIRESMSVHCGFVRGTKPGRNTGFDMDEDDLLEMEQCHGIVVASAIFGNFDEINEPKNISDYSKETVCFLMFVDDETEKYLRSSGRLGISKKIGLWRIIVAHNLPYTDARRSGKIPKLLLHRMVPNARYSIWLDGKLELVVDPYQILERFLWRKNATFAISKHYKRFDVFVEAEANKAAGKYDNASIDFQIEFYKNEGLTPYTEAKLPLISDVPEGCVIVREHVPISNLFTCLWFNEVDRFTSRDQISFSIVRDKLLSRVDFHFLMFLDCERRNFVVQKYHRDILERLAAPVAVGLSPPPSPLHRVRETSPEKVGRRVPGKHGRERRPSSRRHRKVVAGGRDTNIEANYTVLKV* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1920 579 MobiDBLite consensus disorder prediction 545 559 - -
Pvu6g1920 579 MobiDBLite consensus disorder prediction 524 559 - -
Pvu6g1920 579 PANTHER DUF616 FAMILY PROTEIN 32 567 - -
Pvu6g1920 579 Pfam Protein of unknown function (DUF616) 193 506 IPR006852 -
Pvu6g1920 579 PANTHER ALKALINE CERAMIDASE-RELATED 32 567 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1920 Pvu-Chr6 29407957 29413481 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1920 - - gmx:100792761 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1920 6 29407957 29413481 Pvu6g1920 6 29407957 29413481 ECH
Pvu2g2359 2 39440516 39446393 Pvu6g1920 6 29407957 29413481 PCT