Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1827 ATGTACACCTCAGGAAACATTCCCAAAGGTGCGTTCCTGTTACCCCTCACTCTGTTTCTCATCGTGCCACTCCTTCCTCTGCTCAGAAACTTCATGCAACCATCTCCAAACACTGATGCTACCACCAACTTGGAAACCAAAGAAACAAAAAAATGCAACATTTTTTCCGGAAATTGGGTCCCTTATCCCCAACAACCTTACTACTCTAATCAAACCTGCCCTTTCATACTAGACCAGCTTAATTGCATCAAGAATGGAAGATCCGACAGAGATTTTCTCAAGTTAAGGTGGAAACCTCATGATTGTGAGCTTCCACTATTTGATGCAACACAGTTCCTGGAGCTGGTACGAGGAAAGTCTATCGCCTTTGTCGGAGACTCAATGGGAAGAAATCAACTAGAGTCTTTACTGTGCCTAATAAATACTGTTGCACGTCCTGAGGATATTACAGCGAAGCATACATCATATGATGACATATTTTTCAGATGGTGGTTCGTGGCTGATTACAATTTCACTGTCACAACACTGTGGTCGCCCTTTTTAGTAAAATTCAATGACTCCGATCCCAGTGGTCGTGCTTACTACAGCGCCACCAAGCTTTATCTGGACGAGCCAGACGAAGCATGGAGCAGCAAAATCAAGAATTTTGACTATGTGGTTTTCTCAACAGGGCAATGGTTCTTCCGACCATTAACATTCTACGAAAAAGGGCAAGTTGTGGGGTGCCAAAAGTGCCAGAACTCGACAGAGCTGAACTTCTACGGTTACAAGAAGGCGTTTCAGACAGCTTTTAGAACGCTGAGAAACGTTGAAGGGTTCAAAGGGGTGTCGTTTTTGGTGAGTCACTCTCCGGAGCACTTTGAGAACGGGGCGTGGAATGAGGGAGGGAGTTGTAACAGGACAAAACCGTTTAGCTTGGAAGAAAGAGGGGTGTATGAAAGTGGAGACATTGTAAAGGCCTTGCATGAGATACAAGTGGAAGAGTTTAATGCAGCAAGAGAAAATGGTTTGAGGTTTGGTTTGATAGATATAACTGATGCAATGGCTATGAGGGCTGATGGACACCCCAGTAGGTTTAAGCCAGGGAATAAGAACGTTAATGACTGTGTTCACTGGTGTTTGCCAGGTGCTGTTGACACTTGGAATGAGTTTTTGCTGTATTTGATGAAATTGGAAGGCCAAAAGCATAATAACATGTTGTGA 1203 0.4389 MYTSGNIPKGAFLLPLTLFLIVPLLPLLRNFMQPSPNTDATTNLETKETKKCNIFSGNWVPYPQQPYYSNQTCPFILDQLNCIKNGRSDRDFLKLRWKPHDCELPLFDATQFLELVRGKSIAFVGDSMGRNQLESLLCLINTVARPEDITAKHTSYDDIFFRWWFVADYNFTVTTLWSPFLVKFNDSDPSGRAYYSATKLYLDEPDEAWSSKIKNFDYVVFSTGQWFFRPLTFYEKGQVVGCQKCQNSTELNFYGYKKAFQTAFRTLRNVEGFKGVSFLVSHSPEHFENGAWNEGGSCNRTKPFSLEERGVYESGDIVKALHEIQVEEFNAARENGLRFGLIDITDAMAMRADGHPSRFKPGNKNVNDCVHWCLPGAVDTWNEFLLYLMKLEGQKHNNML* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1827 400 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 104 386 IPR026057 GO:0016740
Pvu6g1827 400 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 6 393 - -
Pvu6g1827 400 Pfam PMR5 N terminal Domain 50 103 IPR025846 -
Pvu6g1827 400 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 6 393 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1827 Pvu-Chr6 28669728 28671508 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1827 - - gmx:100784821 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1827 6 28669728 28671508 Pvu6g1827 6 28669728 28671508 ECH