Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1826 ATGTCCGCGGAAATGCACAACGAATCAGCCTCATCGTCAAGGGCTGTGGCTGCTGCCTCTGATCATCGCCATCAGCAGCAGCCGGTGCCGGCCCCTCTCAGCCGCTACGAATCGCAGAAGCGCCGAGACTGGAACACCTTCGGACAGTACCTGAAGAACCAGACACCCCCAGTTTCACTTTCCCTGTGCAACTTCAACCACGTGCTGGAGTTCCTTCGCTACCTCGACCAATTTGGAAAAACGAAGGTCCATCTCCACGGTTGCATCTTCTTCGGGCAGCCCGATCCGCCGGCGCCATGCACCTGTCCTCTCAGACAGGCATGGGGGAGTCTGGATGCGCTCATCGGACGGCTTAGGGCGGCCTACGAGGAGCACGGAGGGTCCCCGGAGACTAATCCCTTTGGCAGCGGTGCCATTCGCGTGTACCTCCGTGAGGTGAAGGAGTGTCAAGCAAAGGCAAGAGGGATCCCTTACACCAAGAAAAAGAAGAAGAAGAACCAACTCAAGGGCCCTCATCACCCTCCCAAGTCCCTCAAGCAATTGGCCACTTGA 552 0.5779 MSAEMHNESASSSRAVAAASDHRHQQQPVPAPLSRYESQKRRDWNTFGQYLKNQTPPVSLSLCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKECQAKARGIPYTKKKKKKNQLKGPHHPPKSLKQLAT* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1826 183 ProSiteProfiles ALOG domain profile. 35 162 IPR006936 -
Pvu6g1826 183 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 9 171 - -
Pvu6g1826 183 MobiDBLite consensus disorder prediction 1 20 - -
Pvu6g1826 183 MobiDBLite consensus disorder prediction 156 172 - -
Pvu6g1826 183 PANTHER PROTEIN G1-LIKE2 9 171 IPR040222 -
Pvu6g1826 183 MobiDBLite consensus disorder prediction 1 38 - -
Pvu6g1826 183 Pfam ALOG domain 25 148 IPR006936 -
Pvu6g1826 183 MobiDBLite consensus disorder prediction 154 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1826 Pvu-Chr6 28644997 28651046 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1826 - - gmx:100306082 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1826 6 28644997 28651046 Pvu6g1826 6 28644997 28651046 ECH
Pvu6g1826 6 28644997 28651046 Pvu11g1761 11 44038252 44048824 ECH
Pvu5g0984 5 28410925 28415389 Pvu6g1826 6 28644997 28651046 ECH
Pvu11g1348 11 29132470 29135811 Pvu6g1826 6 28644997 28651046 ECH
Pvu6g1826 6 28644997 28651046 Pvu11g1348 11 29132470 29135811 ECH
Pvu11g1761 11 44038252 44048824 Pvu6g1826 6 28644997 28651046 ECH