Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1545 ATGTCTTCCTTACGGAGAATCAATTGTTCTATCAATGTCCCTAAACTACCTGCTGGAGTCTCCTTTTCAGTTCCCAAAGTAGCATCATCTAGGAGAAGTATGGTTGAGGAATTTGGAAAATTCACAGTCACAGACAATTATAAATCCTCTTTTGCGGAAAAGAATGACACCAACAAAATACTGCACGATGGTGATCTATGTAACACTATAAATTCTGAGGCCATTATTCAACTCTACGCAATCTTGGAGGCTGTGGCTGACAGAATTGAAATGCATACCAACGTTGGAGAACAACGCAACAATTGGAACACCCTCTTGTTAAACTCCATCAACATGCTAACGCTCACGGCCTCAACCATGGCTGGTGTTGCAGGCGCGGGAAGTTGTGAAGGTGCACCACTTTTGGCTCTTAAACTATCATCTGCTCTTTTGTTTTCTGCAGCCACTGGGATGCTACTTGCTACCAACAAAATCCAACCCTCACAACTTGCCGAGGAACAAAGAAATGCTGCAAGACTTTTTAAGCAGCTTCAGGCACAGATCCAAACCACAATCGCTGTTGGAAATCCCAGTGAAAGTGACGTGAGGGGTGCTATGGAGAGGGTTTTGGCGTTGGACAAAGCTTATCCAATGCCTTTGTTAGGAGGAGCAATGCTTGAAAAGTTTCCTGAAAAGTTTGAAGCTGCTAGATGGTGGCCACAAAGTGGATTGAACATTAAGAAAGCACAGATGAAAATTAAGAAGAATAATGGATGGAATGTGGAGTTGGAAGAGGAAATGAGGGAGGTTATGGAAGTGGTGAAGAGAAAAGACATGGAAGACTATGAGAGGTTGGGGAACATTGCACTGAAGATAAACAAGGGTTTAGCTATTTCAGCACCTTTGCTCACTGGAATTGCAGCATTAGGGTCTGTGTTATCAGGAGACGGTTTCGTTCCTGTGGTGGCAGGGGCCTTGGCTACAGTGGTGAATGCTTTTGAGCATGGAGGGCAAGTTGGAATGGTGTATGAAATGTACAGAAACTGTGGTGGATTTTTCCAGCTCTTGGAAGAGACAATTGAAGCCACAATTGAAGAGAAAGACTTGGAGAAAAGAGAAAATGGGGAGCTGTTTGAATTGAAGATGGCCTTGCAATTGGGAAGAAGTGTATCAGAGCTGAGACAACTTGCTTCAAAATCTGCTTCATGTCGTATAGAAGAGAGGGAGATAGATGAATTCGCTAGCAAACTCTTCTAA 1236 0.4337 MSSLRRINCSINVPKLPAGVSFSVPKVASSRRSMVEEFGKFTVTDNYKSSFAEKNDTNKILHDGDLCNTINSEAIIQLYAILEAVADRIEMHTNVGEQRNNWNTLLLNSINMLTLTASTMAGVAGAGSCEGAPLLALKLSSALLFSAATGMLLATNKIQPSQLAEEQRNAARLFKQLQAQIQTTIAVGNPSESDVRGAMERVLALDKAYPMPLLGGAMLEKFPEKFEAARWWPQSGLNIKKAQMKIKKNNGWNVELEEEMREVMEVVKRKDMEDYERLGNIALKINKGLAISAPLLTGIAALGSVLSGDGFVPVVAGALATVVNAFEHGGQVGMVYEMYRNCGGFFQLLEETIEATIEEKDLEKRENGELFELKMALQLGRSVSELRQLASKSASCRIEEREIDEFASKLF* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1545 411 Coils Coil 253 273 - -
Pvu6g1545 411 Pfam Petal formation-expressed 77 387 IPR027949 -
Pvu6g1545 411 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 2 411 IPR027949 -
Pvu6g1545 411 PANTHER PLANT-LIKE PROTEIN, PUTATIVE-RELATED 2 411 - -
Pvu6g1545 411 Coils Coil 346 366 - -
Pvu6g1545 411 Coils Coil 163 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1545 Pvu-Chr6 26148748 26150086 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1545 - - gmx:100800558 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1545 6 26148748 26150086 Pvu6g1545 6 26148748 26150086 ECH
Pvu3g0834 3 12914097 12914746 Pvu6g1545 6 26148748 26150086 PCT