Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g1531 ATGGCATCGTCAGCAGCGCCGTCGCTAAACGCAGTGCTGGATCGCGTCCAAGGGGCTACTGAGCGCTCTGGCCGGAATGTGCAAGAGATCCGTGTTGTGGCGGCTAGCAAGACTAAATCAGTTTCTGCTCTCCGTCAGGTATACGACGCCGGCCATAGATTCTTCGGCGAGAACTACGTTCAAGAACTCCTTCAGAAAGCTCCTCAGCTTCCCGGTGACATCGAGTGGCATCTCATTGGCAATTTGCAGAGTAACAAAGTCAAGCCTCTTATCGCTGGTGTTCCCAACCTTGCTTGTGTAGAATCTGTGGATGATGAGAAGATTGCAAATCTTCTTGATCGTGCTGTAGCAAATGTTGGCAGGAAACCGTTGAAGGTTTTTGTTCAAGTGAATACGAGCGGAGAAACCTCCAAATTTGGTGTTGAACCAGCTGTGTGTGTGGATCTTGTAAAGCACATCACAAACTGCTCAAACCTTGAGTTTTCTGGTCTCATGACAATTGGCATGCTAGATTATTCATCCACCCCAGAAAATTTTAAGATGTTGTCCAATTGCAGAACTGAAGTTTGTAAAGCACTTGGAATATCAGAAACGCAATGTGAGTTATCAATGGGCATGACTGGAGACTTTGAGCAAGCTATCGAGATGGGAAGTACTAATGTTAGGATTGGAACTGCCATATTTGGAGCCAGAGAATATCAAACTAAAGAAGAGAAGTAG 720 0.4583 MASSAAPSLNAVLDRVQGATERSGRNVQEIRVVAASKTKSVSALRQVYDAGHRFFGENYVQELLQKAPQLPGDIEWHLIGNLQSNKVKPLIAGVPNLACVESVDDEKIANLLDRAVANVGRKPLKVFVQVNTSGETSKFGVEPAVCVDLVKHITNCSNLEFSGLMTIGMLDYSSTPENFKMLSNCRTEVCKALGISETQCELSMGMTGDFEQAIEMGSTNVRIGTAIFGAREYQTKEEK* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g1531 239 SUPERFAMILY PLP-binding barrel 5 229 IPR029066 -
Pvu6g1531 239 TIGRFAM TIGR00044: pyridoxal phosphate enzyme, YggS family 8 231 IPR011078 GO:0030170
Pvu6g1531 239 PANTHER PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEIN 4 236 - -
Pvu6g1531 239 Pfam Alanine racemase, N-terminal domain 13 231 IPR001608 -
Pvu6g1531 239 CDD PLPDE_III_YBL036c_euk 9 229 - -
Pvu6g1531 239 PIRSF YBL036c_PLPDEIII 2 237 IPR011078 GO:0030170
Pvu6g1531 239 Gene3D Alanine racemase 1 239 IPR029066 -
Pvu6g1531 239 Hamap Pyridoxal phosphate homeostasis protein. 7 230 IPR011078 GO:0030170
Pvu6g1531 239 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 4 236 IPR011078 GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g1531 Pvu-Chr6 26052939 26055888 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g1531 K06997 - gmx:100527295 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1531 6 26052939 26055888 Pvu6g1531 6 26052939 26055888 ECH